Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 0.0e+00 1671.4 855 100.0
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 0.0e+00 1246.1 963 72.3
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 0.0e+00 1243.0 963 71.8
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 0.0e+00 1082.8 968 63.9
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 7.0e-223 778.1 961 48.1
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.2e-217 760.8 961 46.7
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 3.7e-216 755.7 963 47.0
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 4.1e-215 752.3 959 46.6
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 7.8e-214 748.0 977 46.2
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.5e-212 743.8 962 46.0
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 7.8e-206 721.5 929 46.7
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.7e-205 720.3 963 45.3
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.9e-204 716.8 873 47.5
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 8.0e-203 711.4 826 47.7
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 2.3e-202 709.9 963 43.6
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 1.5e-201 707.2 967 42.6
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 2.0e-201 706.8 955 44.7
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 2.9e-200 703.0 963 44.3
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 4.9e-200 702.2 907 46.9
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.9e-199 700.3 967 43.8
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.2e-199 699.5 964 43.5
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 2.7e-198 696.4 985 42.3
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 1.7e-197 693.7 893 46.1
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.7e-197 693.7 963 43.6
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 1.1e-196 691.0 928 44.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 5.6e-196 688.7 962 42.7
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 7.3e-196 688.3 967 42.8
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 9.5e-196 688.0 964 43.4
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 6.2e-195 685.3 919 45.3
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.1e-194 684.5 932 43.9
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.8e-194 683.7 967 42.6
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 5.2e-194 682.2 964 43.5
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 6.8e-194 681.8 965 42.6
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 1.2e-193 681.0 862 45.4
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.1e-191 674.5 962 43.1
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 3.5e-190 669.5 962 42.4
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 2.5e-188 663.3 964 42.0
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.5e-185 654.1 964 42.5
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 1.7e-184 650.6 968 42.1
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.8e-184 649.4 1043 41.4
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 4.9e-184 649.0 1020 39.5
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 1.1e-180 637.9 970 40.1
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.1e-180 637.9 972 39.9
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 3.3e-180 636.3 965 41.0
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 7.6e-177 625.2 780 47.1
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 8.4e-176 621.7 789 45.1
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 5.4e-175 619.0 680 50.3
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.6e-171 607.4 885 40.9
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 3.1e-170 603.2 967 39.1
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 2.0e-169 600.5 966 38.4
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.7e-168 597.4 942 41.7
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 1.7e-168 597.4 964 38.5
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 2.2e-168 597.0 880 40.5
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 3.0e-165 586.6 969 37.9
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 2.0e-161 573.9 872 39.1
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 5.8e-161 572.4 962 37.4
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 4.2e-159 566.2 952 38.1
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.2e-158 564.7 958 36.0
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 3.5e-158 563.1 790 44.4
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 7.9e-158 562.0 890 38.5
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 2.3e-157 560.5 792 43.3
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 2.3e-157 560.5 967 38.4
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 3.3e-156 556.6 882 39.8
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.0e-152 545.0 862 39.0
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.7e-152 544.3 960 37.3
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 6.1e-150 535.8 749 41.5
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 1.9e-148 530.8 968 37.2
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 9.7e-148 528.5 960 36.8
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.1e-146 525.0 962 36.4
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 5.3e-146 522.7 965 36.8
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 4.5e-145 519.6 969 35.6
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 2.0e-140 504.2 964 35.8
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.6e-134 484.6 821 37.8
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 4.7e-134 483.0 983 35.7
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 5.1e-133 479.6 794 38.2
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.7e-131 474.6 890 36.0
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 5.0e-128 463.0 995 34.3
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 9.4e-119 432.2 859 35.2
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 2.1e-110 404.4 652 39.6
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 4.5e-105 386.7 617 42.9
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 3.8e-104 383.6 911 30.8
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 7.0e-98 362.8 556 40.1
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 2.7e-97 360.9 412 48.5
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.3e-96 358.6 647 35.2
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 6.6e-96 356.3 564 38.7
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 1.5e-92 345.1 860 29.0
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 6.6e-88 329.7 840 28.1
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 5.1e-80 303.5 859 29.0
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.8e-77 295.0 500 39.0
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 4.4e-76 290.4 474 39.9
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 5.8e-76 290.0 393 46.1
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 3.8e-67 260.8 408 38.2
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 3.9e-64 250.8 386 42.5
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 2.5e-63 248.1 535 31.6
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 2.0e-60 238.4 339 41.9
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 1.6e-57 228.8 341 42.8
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 5.6e-55 220.3 388 37.6
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 9.6e-47 193.0 211 46.0
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 6.2e-46 190.3 351 35.3
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.9e-43 181.4 269 39.0
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 2.5e-42 178.3 203 43.8
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 1.2e-41 176.0 321 35.8
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 2.9e-35 154.8 165 46.1
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 2.7e-33 148.3 245 36.7
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.4e-29 135.2 176 41.5
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 4.5e-28 131.0 196 41.8
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 4.5e-28 131.0 196 41.8
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 4.5e-28 131.0 151 42.4
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 4.8e-22 110.9 85 61.2
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 1.2e-20 106.3 96 52.1
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 5.9e-20 104.0 92 58.7
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 7.7e-20 103.6 90 58.9
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.7e-19 102.4 95 52.6
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.2e-19 102.1 143 39.9
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 4.2e-18 97.8 180 33.9
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 4.2e-18 97.8 180 33.9
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 7.2e-18 97.1 97 51.5
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.8e-16 92.4 244 29.1
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 9.7e-15 86.7 90 51.1
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.3e-14 86.3 139 33.8
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.7e-14 85.9 80 53.8
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.4e-13 82.8 87 49.4
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 3.5e-12 78.2 190 32.6
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 5.9e-12 77.4 93 38.7
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 2.2e-11 75.5 63 57.1
SEGI_12195 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.6e-09 69.3 101 37.6
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.1e-09 68.9 62 48.4
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 8.0e-09 67.0 65 47.7
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 3.0e-08 65.1 65 46.2
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.6e-07 62.0 170 30.0
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 7.5e-07 60.5 73 38.4
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 7.5e-07 60.5 174 31.6


User provided reference genes

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