Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 2.5e-82 308.9 181 100.0
MELO3C023663.2 Cucumis melo HOM05D029613 ORTHO05D007393 1.6e-47 193.4 181 61.3
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 4.7e-44 181.8 191 59.7
CsaV3_7G024090 Cucumis sativus L. HOM05D029613 ORTHO05D007393 1.3e-30 137.1 84 88.1
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 5.8e-18 95.1 169 40.2
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 4.6e-15 85.5 180 35.0
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 1.7e-14 83.6 183 36.1
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 1.1e-13 80.9 173 37.0
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 4.3e-13 79.0 179 35.2
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 2.1e-12 76.6 185 35.7
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 8.1e-12 74.7 187 35.3
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 6.8e-11 71.6 180 34.4
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.2e-10 70.9 179 33.5
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.0e-10 70.1 179 34.1
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 7.6e-10 68.2 171 32.7
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 9.9e-10 67.8 182 31.9
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 1.3e-09 67.4 159 38.4
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.3e-09 67.4 173 32.9
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 1.3e-09 67.4 183 33.9
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 3.8e-09 65.9 181 35.4
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.4e-08 63.9 175 32.0
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 3.2e-08 62.8 173 32.4
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 7.1e-08 61.6 173 32.4
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 7.1e-08 61.6 166 30.7
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 9.3e-08 61.2 180 33.9
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 1.2e-07 60.8 169 33.7
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.6e-07 60.5 175 33.7
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.7e-07 59.7 184 28.8
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 2.7e-07 59.7 176 30.1
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 3.5e-07 59.3 184 31.0
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 6.0e-07 58.5 172 31.4
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 1.3e-06 57.4 179 29.6
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.7e-06 57.0 178 36.5
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 2.3e-06 56.6 184 32.6
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 3.0e-06 56.2 189 29.6
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 3.9e-06 55.8 189 31.7
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 5.1e-06 55.5 189 28.6
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 6.6e-06 55.1 190 27.9


User provided reference genes

Program Settings