Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 0.0e+00 1211.4 605 100.0
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 1.5e-307 1058.9 605 87.4
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 5.9e-200 701.4 605 60.3
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.0e-192 676.4 609 58.1
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.5e-190 670.2 606 59.4
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 8.0e-189 664.5 606 59.2
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 2.6e-187 659.4 604 57.3
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 2.5e-182 642.9 608 56.9
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 4.2e-182 642.1 606 57.1
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 9.5e-182 641.0 608 57.1
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.8e-180 636.7 609 56.8
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 1.8e-180 636.7 610 56.6
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 3.0e-180 636.0 625 54.4
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.2e-176 624.0 609 56.3
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 4.5e-176 622.1 607 55.8
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 4.3e-174 615.5 613 53.8
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 4.1e-169 599.0 607 52.7
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 1.2e-168 597.4 612 53.1
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 2.0e-168 596.7 608 53.9
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 3.5e-168 595.9 687 49.1
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 5.9e-168 595.1 522 59.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 1.0e-167 594.3 573 55.5
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 5.0e-167 592.0 609 53.5
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 6.6e-167 591.7 610 53.3
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 2.5e-166 589.7 610 53.4
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 4.7e-165 585.5 561 56.7
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 3.2e-161 572.8 608 52.6
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 1.6e-160 570.5 626 51.1
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 7.8e-160 568.2 608 52.6
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 1.7e-159 567.0 610 51.5
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.1e-156 557.8 607 50.6
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.4e-156 557.4 654 50.0
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 3.4e-155 552.7 606 50.8
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 3.4e-155 552.7 609 51.9
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 7.5e-155 551.6 606 50.8
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 7.5e-155 551.6 606 50.8
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 8.3e-154 548.1 603 51.4
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 2.4e-153 546.6 603 51.2
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 4.1e-153 545.8 626 48.1
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 1.6e-152 543.9 609 50.2
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.6e-152 543.9 619 51.7
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 1.1e-150 537.7 625 49.8
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.5e-150 537.3 610 50.3
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.9e-150 537.0 622 47.9
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 2.5e-150 536.6 608 50.2
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 2.5e-150 536.6 629 48.3
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 3.3e-150 536.2 618 46.8
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 7.3e-150 535.0 611 50.2
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 7.3e-150 535.0 631 48.7
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 9.5e-150 534.6 317 84.5
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 1.2e-149 534.3 631 48.7
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 2.8e-149 533.1 609 49.9
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 1.1e-148 531.2 612 49.3
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 2.3e-148 530.0 629 47.5
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 2.6e-147 526.6 607 47.0
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 3.8e-146 522.7 610 48.7
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.8e-146 522.7 629 47.9
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 8.4e-146 521.5 614 49.5
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 1.9e-145 520.4 639 46.2
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 3.2e-145 519.6 625 48.8
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 5.4e-145 518.8 631 47.9
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.0e-143 513.1 643 46.5
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 2.5e-142 510.0 640 46.1
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 3.3e-142 509.6 481 57.8
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.6e-141 507.3 628 45.2
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 8.1e-141 505.0 625 45.4
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 4.0e-140 502.7 277 91.7
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 1.5e-139 500.7 624 45.5
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 2.2e-138 496.9 623 47.5
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.9e-137 493.8 629 45.2
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 3.9e-135 486.1 715 42.7
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 5.1e-135 485.7 627 45.3
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 2.5e-134 483.4 645 43.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 1.1e-132 478.0 619 44.9
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 5.8e-131 472.2 622 44.4
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.3e-119 434.5 485 51.8
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.1e-117 427.2 613 41.1
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 2.5e-113 413.7 479 46.8
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 2.7e-112 410.2 486 50.6
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 6.0e-112 409.1 394 57.4
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.9e-110 404.1 395 54.9
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 2.8e-109 400.2 652 40.5
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 3.6e-96 356.7 408 49.5
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 3.0e-95 353.6 361 51.2
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 5.1e-95 352.8 328 54.9
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 7.0e-84 315.8 316 55.4
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 2.0e-83 314.3 277 58.1
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 3.8e-74 283.5 334 48.8
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 3.7e-61 240.4 276 51.1
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 8.6e-58 229.2 633 29.9
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 1.5e-57 228.4 224 51.8
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 7.5e-54 216.1 325 38.5
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 3.5e-51 207.2 224 53.6
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 1.5e-49 201.8 232 47.8
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 5.8e-46 189.9 277 44.0
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 3.2e-44 184.1 616 28.1
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 3.6e-40 170.6 267 39.7
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 1.3e-37 162.2 399 31.1
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.9e-33 148.3 287 34.8
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 4.7e-32 143.7 170 50.6
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 1.3e-26 125.6 149 47.7
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 7.3e-25 119.8 159 39.6
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 6.2e-24 116.7 150 46.7
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 6.2e-24 116.7 150 48.0
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.4e-23 115.5 171 40.9
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.2e-22 112.5 191 38.7
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 3.4e-22 110.9 360 28.1
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 7.6e-22 109.8 120 47.5
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 7.6e-22 109.8 117 47.9
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 8.4e-21 106.3 263 31.9
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 2.4e-20 104.8 122 46.7
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 4.2e-20 104.0 126 48.4
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 6.0e-19 100.1 113 44.2
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 2.3e-18 98.2 109 45.0
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 6.6e-18 96.7 258 29.5
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 2.5e-17 94.7 196 34.7
Sed0003411 Sechium edule HOM05D006061 ORTHO05D007450 7.3e-17 93.2 56 80.4
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 1.2e-14 85.9 113 43.4
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.1e-12 79.3 101 43.6
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 1.3e-10 72.4 96 43.8
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 2.5e-09 68.2 77 51.9
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 4.5e-06 57.4 125 34.4


User provided reference genes

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