Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 4.7e-100 367.9 183 100.0
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 2.6e-82 308.9 183 85.8
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 2.4e-80 302.4 183 83.6
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 7.8e-79 297.4 183 81.4
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 1.4e-48 196.8 171 61.4
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 1.2e-47 193.7 185 60.5
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 7.8e-47 191.0 179 59.2
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 7.8e-47 191.0 163 62.6
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.3e-46 190.3 145 69.0
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 2.3e-46 189.5 145 69.0
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 2.3e-46 189.5 114 78.1
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 3.0e-46 189.1 146 66.4
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 3.9e-46 188.7 154 67.5
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 3.9e-46 188.7 154 67.5
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 5.1e-46 188.3 113 83.2
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 5.1e-46 188.3 120 76.7
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 5.1e-46 188.3 157 64.3
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 6.6e-46 188.0 122 73.8
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 6.6e-46 188.0 180 57.2
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 6.6e-46 188.0 131 71.8
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 6.6e-46 188.0 157 63.7
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 8.7e-46 187.6 150 66.0
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.9e-45 186.4 147 66.7
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 4.3e-45 185.3 160 58.1
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 4.3e-45 185.3 147 66.0
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 7.3e-45 184.5 140 70.0
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 7.3e-45 184.5 152 64.5
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 9.6e-45 184.1 111 80.2
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.2e-44 183.7 147 66.0
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.6e-44 183.3 128 72.7
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 1.6e-44 183.3 105 84.8
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 1.6e-44 183.3 146 65.8
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 2.8e-44 182.6 110 78.2
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 4.7e-44 181.8 103 86.4
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 8.1e-44 181.0 188 55.9
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 1.8e-43 179.9 110 77.3
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 1.8e-43 179.9 103 83.5
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 1.8e-43 179.9 109 82.6
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 3.1e-43 179.1 159 59.1
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 5.2e-43 178.3 151 62.9
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 5.2e-43 178.3 145 66.2
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.2e-42 177.2 184 52.7
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.5e-42 176.8 106 82.1
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 1.5e-42 176.8 125 72.0
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 2.0e-42 176.4 110 77.3
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.6e-42 176.0 111 78.4
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.6e-42 176.0 111 78.4
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 2.6e-42 176.0 103 81.6
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 7.6e-42 174.5 133 66.2
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 9.9e-42 174.1 157 56.7
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 1.3e-41 173.7 109 78.0
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.7e-41 173.3 107 77.6
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 2.9e-41 172.6 153 59.5
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 3.8e-41 172.2 169 52.1
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.8e-41 172.2 148 62.2
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 6.4e-41 171.4 157 56.1
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 8.4e-41 171.0 107 78.5
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 1.4e-40 170.2 107 76.6
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 2.4e-40 169.5 107 75.7
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 2.4e-40 169.5 119 73.9
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 4.2e-40 168.7 102 76.5
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 5.4e-40 168.3 118 67.8
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 5.4e-40 168.3 111 69.4
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 7.1e-40 167.9 112 76.8
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 9.3e-40 167.5 110 72.7
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 9.3e-40 167.5 109 72.5
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 1.2e-39 167.2 111 69.4
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.2e-39 167.2 153 59.5
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.6e-39 166.8 110 74.5
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.1e-39 166.4 111 69.4
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 2.1e-39 166.4 111 68.5
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 2.1e-39 166.4 111 70.3
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.1e-39 166.4 111 69.4
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 2.1e-39 166.4 113 69.9
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 2.1e-39 166.4 109 71.6
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 4.6e-39 165.2 105 75.2
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 4.6e-39 165.2 110 70.9
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 7.8e-39 164.5 109 73.4
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.3e-38 163.7 130 63.1
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 3.0e-38 162.5 115 66.1
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 5.1e-38 161.8 108 73.1
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 5.1e-38 161.8 109 73.4
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 6.6e-38 161.4 106 73.6
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 1.1e-37 160.6 110 71.8
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 1.9e-37 159.8 107 71.0
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 2.5e-37 159.5 112 69.6
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 3.3e-37 159.1 111 68.5
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 9.6e-37 157.5 110 70.9
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 1.3e-36 157.1 111 70.3
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 1.3e-36 157.1 111 70.3
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 1.3e-36 157.1 111 70.3
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.1e-35 154.1 108 70.4
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.2e-34 150.6 89 80.9
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 1.5e-34 150.2 106 62.3
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.4e-34 149.1 86 83.7
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 5.8e-34 148.3 86 81.4
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.2e-33 146.4 107 63.6
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 2.4e-32 142.9 88 78.4
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.0e-31 138.3 99 70.7
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.9e-29 133.3 124 53.2
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.9e-29 133.3 124 53.2
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 5.6e-29 131.7 102 57.8
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.1e-27 127.5 110 59.1
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 4.0e-27 125.6 109 55.0
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.1e-11 74.3 37 89.2


User provided reference genes

Program Settings