Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 3.0e-134 481.9 251 100.0
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 2.8e-119 432.2 251 91.2
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.5e-109 399.8 251 84.9
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 2.4e-99 365.9 251 77.3
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 6.6e-89 331.3 253 70.0
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 4.8e-87 325.1 236 70.8
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 6.2e-87 324.7 247 69.6
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 1.8e-86 323.2 221 74.7
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 6.9e-86 321.2 249 67.9
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 9.0e-86 320.9 245 69.8
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 2.6e-85 319.3 242 68.2
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 4.5e-85 318.5 223 72.2
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 2.2e-84 316.2 234 70.9
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.9e-83 313.2 187 80.7
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 3.2e-83 312.4 205 72.7
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 7.1e-83 311.2 237 68.8
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 9.3e-83 310.8 244 68.0
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 9.3e-83 310.8 249 67.1
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.7e-82 309.3 251 67.3
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 4.6e-82 308.5 248 66.5
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.0e-81 307.4 244 66.8
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.8e-81 306.6 187 79.1
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 3.0e-81 305.8 240 67.1
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 3.9e-81 305.4 248 64.1
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 6.7e-81 304.7 183 77.6
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 8.7e-81 304.3 194 77.3
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 8.7e-81 304.3 251 63.7
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 1.5e-80 303.5 243 67.1
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.5e-80 303.5 200 74.0
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.5e-80 303.5 252 64.3
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 4.3e-80 302.0 233 67.0
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.3e-80 302.0 218 70.2
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 5.6e-80 301.6 185 78.4
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 5.6e-80 301.6 252 63.5
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 5.6e-80 301.6 252 65.9
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 7.4e-80 301.2 258 64.7
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 9.6e-80 300.8 226 67.7
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 9.6e-80 300.8 240 66.7
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 1.3e-79 300.4 250 64.8
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 1.3e-79 300.4 199 73.9
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 1.3e-79 300.4 249 65.5
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.6e-79 300.1 177 79.1
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.1e-79 299.7 177 78.0
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.8e-79 299.3 209 70.8
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 4.8e-79 298.5 211 71.1
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 4.8e-79 298.5 193 74.1
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 8.1e-79 297.7 169 82.8
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.1e-78 297.4 209 71.3
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 1.1e-78 297.4 198 72.7
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 1.4e-78 297.0 250 63.6
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 2.4e-78 296.2 170 79.4
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 4.0e-78 295.4 221 68.3
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 6.9e-78 294.7 253 62.1
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 9.0e-78 294.3 248 63.3
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 1.2e-77 293.9 225 66.7
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 1.5e-77 293.5 220 68.2
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.0e-77 293.1 251 62.9
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 4.5e-77 292.0 252 61.9
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 5.8e-77 291.6 237 65.0
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 7.6e-77 291.2 248 62.1
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.0e-76 290.8 219 67.1
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 2.2e-76 289.7 209 68.4
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.2e-76 289.7 245 65.3
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 2.9e-76 289.3 248 64.1
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 2.9e-76 289.3 245 63.3
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 3.8e-76 288.9 251 64.1
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 4.9e-76 288.5 249 62.7
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 8.4e-76 287.7 224 64.7
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.1e-75 287.3 246 60.6
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.4e-75 287.0 238 62.6
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.9e-75 286.6 179 75.4
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 2.5e-75 286.2 185 74.1
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 3.2e-75 285.8 219 67.1
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 5.5e-75 285.0 255 61.6
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 5.5e-75 285.0 255 61.6
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.2e-74 283.9 255 61.2
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 2.1e-74 283.1 255 61.2
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 3.5e-74 282.3 242 62.8
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.0e-73 279.3 182 72.5
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 3.9e-73 278.9 196 71.4
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.9e-72 276.6 247 59.1
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 2.5e-72 276.2 222 67.6
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.5e-72 276.2 193 69.4
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.4e-70 270.4 238 60.5
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 1.8e-70 270.0 251 59.8
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 5.3e-70 268.5 236 63.6
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 5.3e-70 268.5 254 58.7
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 5.3e-70 268.5 254 58.7
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 1.2e-69 267.3 171 74.9
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 1.1e-67 260.8 241 58.1
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 7.2e-67 258.1 250 59.2
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 7.2e-67 258.1 250 59.2
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 1.2e-66 257.3 241 58.9
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 1.6e-66 256.9 152 76.3
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 3.5e-66 255.8 196 60.7
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 7.9e-66 254.6 181 65.2
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 7.9e-66 254.6 181 65.2
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 3.9e-65 252.3 212 60.8
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 6.7e-65 251.5 170 71.2
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 2.5e-64 249.6 234 60.7
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 5.7e-64 248.4 169 69.2
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 5.3e-62 241.9 198 61.6
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.3e-60 237.3 140 77.9
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 2.9e-60 236.1 211 63.5
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.4e-57 227.3 197 56.9
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 6.3e-55 218.4 200 55.0
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.4e-54 216.5 132 77.3
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 3.4e-53 212.6 135 76.3
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.2e-45 187.6 126 69.8
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 4.5e-45 185.7 120 71.7
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.2e-44 183.3 124 73.4
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.3e-36 157.5 105 74.3
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.6e-26 124.0 85 72.9
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 1.0e-25 121.3 214 38.3
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 2.3e-20 103.6 198 31.8
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.9e-19 100.5 188 35.1
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 8.9e-09 65.1 48 62.5
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 5.8e-08 62.4 153 26.8
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 4.9e-07 59.3 153 25.5
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 4.9e-07 59.3 149 26.2
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 4.1e-06 56.2 153 25.5
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 7.0e-06 55.5 202 28.7


User provided reference genes

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