Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 2.0e-225 785.4 392 100.0
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 3.9e-213 744.6 392 95.2
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 1.4e-210 736.1 392 94.4
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 5.9e-201 704.1 391 89.0
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 2.7e-161 572.4 399 73.9
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 2.3e-160 569.3 392 73.5
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 5.0e-160 568.2 381 75.9
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 6.6e-160 567.8 380 75.8
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 6.6e-160 567.8 394 73.4
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 4.3e-159 565.1 369 75.1
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 7.3e-159 564.3 346 81.5
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 4.7e-158 561.6 346 77.5
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 1.4e-157 560.1 395 72.2
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 3.1e-157 558.9 318 85.2
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 6.8e-157 557.8 319 84.0
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 8.9e-157 557.4 392 73.7
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 1.2e-156 557.0 361 78.1
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 1.2e-156 557.0 379 73.4
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 2.0e-156 556.2 393 73.3
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 2.6e-156 555.8 379 73.9
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 2.6e-156 555.8 383 73.1
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 9.8e-156 553.9 392 71.2
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 4.9e-155 551.6 392 72.4
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 6.4e-155 551.2 347 77.5
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 8.3e-155 550.8 318 82.7
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 2.4e-154 549.3 336 79.2
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 2.4e-154 549.3 353 76.8
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 3.2e-154 548.9 368 73.6
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 4.1e-154 548.5 342 78.1
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 5.4e-154 548.1 347 77.2
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 5.4e-154 548.1 338 78.1
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 7.1e-154 547.7 386 72.8
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 7.1e-154 547.7 393 72.0
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 3.5e-153 545.4 347 76.9
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 2.3e-152 542.7 335 77.9
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 2.3e-152 542.7 335 77.6
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 3.0e-152 542.3 389 70.7
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 3.0e-152 542.3 368 73.4
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 3.0e-152 542.3 381 72.4
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 6.6e-152 541.2 329 79.0
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 1.1e-151 540.4 325 79.7
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.9e-151 539.7 335 77.6
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.9e-151 539.7 398 70.4
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 3.3e-151 538.9 323 79.6
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 3.3e-151 538.9 395 70.1
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 3.3e-151 538.9 337 77.2
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 7.3e-151 537.7 319 79.9
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.2e-150 537.0 386 71.0
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 1.6e-150 536.6 394 68.0
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 1.6e-150 536.6 362 72.9
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 1.6e-150 536.6 386 70.5
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 2.8e-150 535.8 376 71.8
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 2.8e-150 535.8 322 78.9
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 6.2e-150 534.6 371 73.0
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 8.1e-150 534.3 354 73.4
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 1.4e-149 533.5 318 78.6
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 1.8e-149 533.1 386 70.2
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 4.0e-149 531.9 319 79.0
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 5.2e-149 531.6 319 79.6
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 5.2e-149 531.6 351 73.5
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 5.2e-149 531.6 351 73.5
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 6.8e-149 531.2 316 79.7
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 8.9e-149 530.8 354 72.6
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 8.9e-149 530.8 384 70.1
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 1.5e-148 530.0 319 79.3
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 3.4e-148 528.9 329 77.2
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 1.3e-147 526.9 388 68.6
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 1.7e-147 526.6 326 77.6
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 2.2e-147 526.2 314 81.2
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.7e-147 525.4 334 76.6
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 6.4e-147 524.6 354 72.0
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 7.1e-146 521.2 384 65.1
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 7.1e-146 521.2 351 71.2
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 9.2e-146 520.8 321 75.1
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 1.6e-145 520.0 372 72.0
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 6.0e-145 518.1 386 69.2
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 1.1e-143 513.8 330 75.8
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 2.5e-143 512.7 386 67.9
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 1.2e-142 510.4 367 69.2
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 1.5e-140 503.4 392 65.6
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 8.4e-139 497.7 392 67.6
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 4.3e-135 485.3 276 83.3
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.6e-134 483.4 397 62.7
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 1.8e-133 479.9 393 65.1
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.4e-130 470.3 360 69.4
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 7.1e-130 468.0 276 81.2
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 1.5e-127 460.3 268 82.1
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 7.4e-127 458.0 375 65.3
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 6.9e-125 451.4 267 80.5
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 5.1e-120 435.3 322 68.9
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 3.3e-119 432.6 261 80.5
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 1.1e-117 427.6 318 64.5
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 2.6e-116 422.9 320 61.2
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 4.5e-116 422.2 382 55.5
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.8e-112 410.2 268 72.0
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 1.5e-108 397.1 332 57.5
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 2.9e-107 392.9 267 74.2
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 5.5e-106 388.7 304 68.4
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-104 384.4 272 71.7
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 4.8e-102 375.6 290 66.9
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.3e-99 367.5 291 68.0
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 9.4e-90 334.7 226 71.2
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 5.0e-83 312.4 269 66.5
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 7.7e-76 288.5 339 45.4
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 1.3e-75 287.7 320 53.1
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 5.0e-75 285.8 241 62.2
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 6.8e-72 275.4 322 42.2
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 6.8e-72 275.4 322 42.2
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 1.8e-69 267.3 311 45.0
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 1.2e-68 264.6 165 75.2
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 2.5e-66 256.9 155 80.0
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 1.6e-60 237.7 130 88.5
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 4.5e-60 236.1 166 71.7
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 2.9e-38 163.7 91 86.8
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 3.2e-37 160.2 406 31.0
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-33 146.7 104 66.3
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 9.9e-31 138.7 79 82.3
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.2e-29 133.7 89 73.0
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.0e-27 128.6 85 65.9
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 2.0e-23 114.4 105 59.0
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 7.6e-23 112.5 91 56.0
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 2.8e-17 94.0 65 67.7
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 6.2e-17 92.8 74 67.6
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 3.1e-16 90.5 59 76.3
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 2.0e-15 87.8 133 39.8
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 2.0e-15 87.8 133 39.8
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 7.6e-15 85.9 54 74.1
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 7.1e-13 79.3 47 78.7
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 1.0e-11 75.5 304 26.6
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.8e-11 74.7 95 46.3
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 3.0e-11 73.9 114 44.7
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 6.7e-11 72.8 110 45.5
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 8.7e-11 72.4 117 44.4
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 2.5e-10 70.9 349 25.2
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 3.3e-10 70.5 276 26.4
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 3.3e-10 70.5 298 26.5
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 5.6e-10 69.7 325 25.8
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 5.6e-10 69.7 350 25.4
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 7.4e-10 69.3 40 77.5
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 1.6e-09 68.2 280 26.8
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 2.8e-09 67.4 283 26.5
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 3.7e-09 67.0 289 26.6
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 4.8e-09 66.6 299 26.8
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 4.8e-09 66.6 75 49.3
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 4.8e-09 66.6 300 26.3
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 6.2e-09 66.2 340 24.4
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 1.1e-08 65.5 282 27.3
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 1.1e-08 65.5 95 43.2
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 1.1e-08 65.5 270 27.8
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 1.4e-08 65.1 279 26.5
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 1.8e-08 64.7 309 25.2
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 6.9e-08 62.8 277 26.0
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 9.0e-08 62.4 42 71.4
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 1.2e-07 62.0 298 25.5
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 1.5e-07 61.6 283 26.1
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 2.6e-07 60.8 36 75.0
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 3.4e-07 60.5 258 27.1
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 4.5e-07 60.1 296 26.4


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