Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 9.3e-198 693.3 350 100.0
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 2.0e-139 499.6 350 76.6
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 7.0e-137 491.1 350 74.0
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 4.2e-97 359.0 335 57.3
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 3.5e-96 355.9 328 56.7
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 6.0e-96 355.1 353 55.2
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 2.3e-95 353.2 314 58.6
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 6.6e-95 351.7 331 57.4
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 1.5e-94 350.5 314 58.3
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.5e-94 350.5 314 58.3
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 3.3e-94 349.4 343 57.1
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 4.3e-94 349.0 321 57.3
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 7.3e-94 348.2 308 60.1
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 8.1e-93 344.7 319 58.0
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 2.4e-92 343.2 322 56.2
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 6.9e-92 341.7 328 56.4
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.2e-91 340.9 326 54.6
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 2.6e-91 339.7 326 54.6
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 3.4e-91 339.3 346 54.3
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 1.3e-90 337.4 335 54.9
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 1.3e-90 337.4 324 55.9
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 2.9e-90 336.3 307 58.0
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 3.8e-90 335.9 297 59.3
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 2.4e-89 333.2 348 52.3
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 4.2e-89 332.4 306 56.2
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 4.2e-89 332.4 347 52.7
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 7.1e-89 331.6 193 87.0
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 9.3e-89 331.3 307 57.0
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 1.2e-88 330.9 303 58.4
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 1.6e-88 330.5 313 54.0
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 7.8e-88 328.2 344 52.9
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 1.0e-87 327.8 307 56.7
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 1.3e-87 327.4 304 57.6
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 1.3e-87 327.4 356 52.2
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 1.7e-87 327.0 348 53.2
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 2.3e-87 326.6 334 53.9
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 3.0e-87 326.2 308 56.8
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 5.1e-87 325.5 313 54.3
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 8.7e-87 324.7 306 55.6
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 8.7e-87 324.7 342 51.8
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 1.5e-86 323.9 313 55.9
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.5e-86 323.2 306 57.2
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 2.5e-86 323.2 313 54.0
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 3.3e-86 322.8 322 52.2
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 5.6e-86 322.0 304 55.9
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 7.3e-86 321.6 325 54.5
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 1.6e-85 320.5 308 55.8
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 1.6e-85 320.5 335 51.0
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 2.8e-85 319.7 311 54.0
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 6.2e-85 318.5 319 52.4
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 1.4e-84 317.4 316 54.1
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 3.1e-84 316.2 335 51.0
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 6.9e-84 315.1 325 52.0
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 3.4e-83 312.8 292 57.2
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 1.3e-82 310.8 343 49.3
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 4.9e-82 308.9 294 55.1
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 6.4e-82 308.5 312 54.8
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 5.4e-81 305.4 296 56.1
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 3.5e-80 302.8 293 54.6
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 4.6e-80 302.4 310 52.6
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 7.9e-80 301.6 314 51.9
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 7.9e-80 301.6 314 51.9
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 7.9e-80 301.6 336 49.7
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 1.0e-79 301.2 309 52.4
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 1.9e-78 297.0 294 53.7
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 3.3e-78 296.2 314 53.2
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 2.8e-77 293.1 310 51.9
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 3.7e-77 292.7 303 52.8
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 1.4e-76 290.8 314 51.3
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 2.4e-76 290.0 314 51.6
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 4.0e-76 289.3 313 50.8
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 1.2e-75 287.7 330 48.5
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 2.6e-75 286.6 306 53.6
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 7.6e-75 285.0 312 50.6
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 7.6e-75 285.0 314 50.3
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 1.7e-74 283.9 327 48.6
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 1.7e-74 283.9 327 48.6
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 8.4e-74 281.6 346 47.7
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 1.4e-73 280.8 324 48.8
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 1.9e-73 280.4 330 47.6
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 5.5e-73 278.9 308 49.7
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 5.5e-73 278.9 287 53.3
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 7.1e-73 278.5 347 47.3
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 2.1e-72 276.9 303 50.2
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 5.6e-70 268.9 307 48.9
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 9.6e-70 268.1 321 48.6
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 1.3e-69 267.7 293 51.5
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 2.8e-69 266.5 321 48.6
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 5.5e-65 252.3 325 45.2
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 4.1e-60 236.1 242 52.5
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 1.2e-59 234.6 305 44.3
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 1.1e-57 228.0 253 49.8
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 1.9e-57 227.3 314 44.9
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 1.4e-55 221.1 253 49.8
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 2.9e-50 203.4 216 52.8
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 8.5e-50 201.8 245 48.2
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 9.4e-49 198.4 236 47.0
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 1.2e-48 198.0 303 38.9
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.0e-47 194.9 204 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 1.1e-41 174.9 249 43.4
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 1.4e-41 174.5 254 43.7
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 1.3e-37 161.4 185 51.4
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.8e-31 141.0 144 52.1
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 3.4e-30 136.7 116 56.9
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 4.0e-15 86.7 191 33.5
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 4.0e-15 86.7 103 42.7
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 5.7e-14 82.8 327 28.1
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 1.8e-12 77.8 60 65.0
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 2.7e-11 73.9 53 71.7
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 4.5e-11 73.2 53 69.8
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 3.3e-09 67.0 116 35.3
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 8.9e-07 58.9 61 41.0


User provided reference genes

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