Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 2.2e-35 151.8 78 100.0
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 1.9e-26 122.1 78 79.5
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 2.5e-26 121.7 78 80.8
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 4.5e-20 100.9 74 70.3
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 1.2e-15 86.3 74 59.5
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 7.0e-13 77.0 72 56.9
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 1.0e-11 73.2 74 52.7
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 1.3e-11 72.8 72 56.9
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 2.9e-11 71.6 72 54.2
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.9e-11 71.2 72 56.9
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 3.9e-11 71.2 79 54.4
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 5.0e-11 70.9 79 54.4
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 5.0e-11 70.9 73 54.8
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 6.6e-11 70.5 79 54.4
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 8.6e-11 70.1 72 58.3
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.9e-10 68.9 75 54.7
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 7.3e-10 67.0 63 52.4
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 1.6e-09 65.9 73 50.7
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.1e-09 65.5 61 59.0
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 2.8e-09 65.1 67 50.7
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 2.8e-09 65.1 73 46.6
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 6.2e-09 63.9 80 53.8
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 1.8e-08 62.4 72 47.2
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 4.0e-08 61.2 77 46.8
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 4.0e-08 61.2 68 50.0
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 5.2e-08 60.8 67 49.3
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 2.0e-07 58.9 75 48.0
unitig_37.g12266 Utricularia gibba HOM05D066644 ORTHO05D010186 3.4e-07 58.2 69 49.3
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 5.8e-07 57.4 66 51.5
Oeu026725.1 Olea europaea HOM05D008383 ORTHO05D010186 5.8e-07 57.4 69 46.4
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 7.5e-07 57.0 72 47.2
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 3.7e-06 54.7 74 44.6
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 4.9e-06 54.3 66 48.5
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 6.4e-06 53.9 72 45.8
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 6.4e-06 53.9 72 45.8
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 6.4e-06 53.9 74 43.2
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 8.3e-06 53.5 71 42.3
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 8.3e-06 53.5 71 42.3
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 8.3e-06 53.5 75 50.7


User provided reference genes

Program Settings