Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 1.3e-179 632.9 316 100.0
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 8.6e-118 427.6 317 73.5
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 2.4e-72 276.6 301 51.2
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 3.5e-71 272.7 317 49.8
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 3.3e-69 266.2 319 48.3
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 4.8e-68 262.3 317 48.6
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 5.3e-67 258.8 323 44.3
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 9.0e-67 258.1 323 45.2
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 3.4e-66 256.1 308 46.8
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 4.9e-65 252.3 300 47.0
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.5e-64 250.0 304 46.7
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 3.2e-64 249.6 300 47.0
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.2e-64 249.6 317 44.8
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 9.3e-64 248.1 307 45.6
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 6.0e-63 245.4 335 42.4
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 6.7e-62 241.9 316 46.2
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.1e-61 241.1 306 45.8
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 2.5e-61 240.0 299 48.5
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 1.3e-60 237.7 349 41.5
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 1.3e-60 237.7 340 42.4
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.1e-59 234.6 319 44.5
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-57 227.6 315 42.9
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-57 227.6 315 42.9
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.7e-57 227.3 307 44.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 2.9e-57 226.5 276 47.5
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 3.8e-57 226.1 300 46.3
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 8.4e-57 224.9 305 47.5
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 3.2e-56 223.0 325 41.2
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 7.1e-56 221.9 304 42.4
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.2e-55 221.1 318 41.2
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 1.3e-54 217.6 350 40.3
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.9e-53 213.8 288 44.1
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.9e-53 213.8 307 40.4
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.3e-53 213.0 287 42.9
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 2.8e-52 209.9 347 37.2
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 4.1e-51 206.1 312 42.9
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 6.9e-51 205.3 299 43.5
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 9.0e-51 204.9 297 43.4
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 2.2e-49 200.3 309 41.7
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.9e-49 199.9 331 41.1
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 3.8e-49 199.5 318 42.5
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 5.0e-49 199.1 320 42.2
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 2.7e-47 193.4 311 40.8
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 4.6e-47 192.6 347 38.0
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 1.4e-46 191.0 302 42.4
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.2e-44 183.7 290 40.7
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 8.2e-44 181.8 323 40.9
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 3.1e-43 179.9 298 38.3
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 1.2e-42 177.9 318 38.4
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 2.6e-42 176.8 364 37.6
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 2.6e-42 176.8 320 37.2
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 3.4e-42 176.4 264 39.0
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 1.0e-41 174.9 296 41.6
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 1.3e-41 174.5 299 36.5
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 2.9e-41 173.3 299 39.8
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 5.0e-41 172.6 308 37.0
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 8.5e-41 171.8 345 36.2
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 8.5e-41 171.8 311 37.9
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 3.6e-39 166.4 348 35.6
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 4.7e-39 166.0 296 38.5
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 3.0e-38 163.3 333 37.8
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 6.7e-38 162.2 332 35.8
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 6.7e-38 162.2 303 37.0
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.1e-37 161.4 285 38.2
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 9.7e-37 158.3 334 34.7
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 2.2e-36 157.1 357 33.3
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 2.2e-36 157.1 374 34.0
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 3.7e-36 156.4 351 33.3
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 4.8e-36 156.0 226 43.8
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 4.8e-36 156.0 262 40.1
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.1e-35 152.9 171 47.4
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 1.5e-34 151.0 341 33.1
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.9e-33 146.7 308 34.1
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 6.5e-33 145.6 309 34.6
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 1.1e-32 144.8 307 35.2
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 1.5e-32 144.4 179 48.6
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.9e-32 144.1 165 46.7
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 3.2e-32 143.3 309 34.6
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 5.5e-32 142.5 406 30.8
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 8.0e-31 138.7 382 31.7
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 8.0e-31 138.7 291 34.0
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 1.5e-29 134.4 325 33.2
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 2.6e-29 133.7 290 34.8
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 3.3e-29 133.3 402 29.6
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 3.3e-29 133.3 300 33.3
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 2.2e-28 130.6 400 29.8
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 2.2e-28 130.6 116 56.9
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 7.0e-27 125.6 303 31.0
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 3.8e-25 119.8 190 40.0
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.1e-23 114.0 342 31.9
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.0e-22 111.7 307 30.0
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 5.2e-22 109.4 116 46.6
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 6.8e-22 109.0 325 30.8
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 5.7e-21 105.9 113 45.1
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 2.2e-20 104.0 220 34.5
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 2.4e-19 100.5 211 32.2
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 2.4e-19 100.5 340 26.5
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 5.4e-19 99.4 153 37.9
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 9.1e-19 98.6 117 45.3
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 1.2e-18 98.2 166 37.3
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 1.2e-18 98.2 438 27.9
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 2.7e-18 97.1 261 29.1
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 5.0e-17 92.8 174 36.2
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 9.4e-16 88.6 202 29.2
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 2.7e-15 87.0 297 29.6
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 6.1e-15 85.9 297 29.0
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 6.1e-15 85.9 114 43.0
Lalb_Chr16g0392231 Lupinus albus HOM05D006585 ORTHO05D007798 5.7e-13 79.3 76 52.6
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 1.3e-12 78.2 199 30.7
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 1.4e-11 74.7 136 35.3
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 3.1e-11 73.6 299 27.1
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 2.3e-09 67.4 109 32.1
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 3.8e-09 66.6 109 32.1
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 1.5e-08 64.7 168 32.1
CDE06G0796 Ceratophyllum demersum HOM05D006585 ORTHO05D007798 7.2e-08 62.4 80 40.0
SHI17755 Sapria himalayana HOM05D006585 ORTHO05D007798 4.7e-07 59.7 117 32.5
Nn3g18224 Nelumbo nucifera HOM05D006585 ORTHO05D007798 6.8e-06 55.8 73 47.9


User provided reference genes

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