Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 7.4e-184 647.1 338 100.0
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.7e-119 433.3 341 72.7
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.8e-118 429.9 341 72.7
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 3.8e-71 272.7 340 49.7
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.3e-68 264.2 344 50.6
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 6.7e-68 261.9 356 46.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.9e-67 260.4 339 49.3
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.3e-66 257.7 341 46.9
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 3.7e-66 256.1 319 50.2
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.8e-66 255.8 341 46.9
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.3e-65 252.3 329 48.0
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 3.4e-64 249.6 345 46.1
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 4.5e-64 249.2 313 52.4
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.0e-63 248.1 327 47.7
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.1e-62 244.6 338 47.0
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 2.5e-62 243.4 348 48.3
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 7.9e-61 238.4 324 47.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 7.9e-61 238.4 305 49.5
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.8e-60 237.3 276 52.9
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 3.9e-60 236.1 289 51.2
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 3.9e-60 236.1 294 49.3
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 6.7e-60 235.3 237 57.8
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.5e-59 234.2 289 53.3
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 2.5e-59 233.4 257 55.3
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 5.7e-59 232.3 257 54.5
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 5.7e-59 232.3 323 46.7
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 5.7e-59 232.3 331 47.1
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 7.4e-59 231.9 342 46.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 7.4e-59 231.9 356 44.1
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 3.7e-58 229.6 283 51.2
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.7e-58 229.6 323 46.4
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 6.3e-58 228.8 288 53.5
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 8.2e-58 228.4 339 45.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.1e-57 228.0 271 50.9
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.4e-57 227.6 310 46.1
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.4e-57 226.9 291 49.1
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 3.1e-57 226.5 310 48.1
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 6.9e-57 225.3 329 46.8
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 9.0e-57 224.9 307 45.9
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.2e-56 224.6 333 47.7
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 3.4e-56 223.0 343 44.9
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.0e-55 221.5 298 48.3
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 1.3e-55 221.1 265 52.1
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 2.9e-55 219.9 356 43.8
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 6.5e-55 218.8 287 48.4
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 6.5e-55 218.8 299 47.8
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.1e-54 218.0 282 47.9
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.4e-54 217.6 278 51.4
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.5e-54 216.9 280 48.2
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.5e-54 216.9 280 48.2
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 2.5e-54 216.9 291 47.8
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 3.2e-54 216.5 282 49.3
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.2e-54 216.1 282 49.3
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 4.2e-54 216.1 287 47.7
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 5.5e-54 215.7 277 46.9
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 7.2e-54 215.3 296 48.0
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 9.3e-54 214.9 278 48.2
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 9.3e-54 214.9 288 48.3
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 9.3e-54 214.9 346 46.2
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 9.3e-54 214.9 326 44.8
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 2.1e-53 213.8 285 48.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.6e-53 213.0 282 47.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.6e-53 212.6 282 47.9
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 6.1e-53 212.2 231 52.8
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.3e-52 211.1 287 48.8
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.3e-52 211.1 265 50.9
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 2.3e-52 210.3 397 39.0
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 8.7e-52 208.4 296 47.0
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.1e-51 208.0 286 45.1
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 3.3e-51 206.5 294 45.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 5.7e-51 205.7 265 48.3
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 9.7e-51 204.9 229 51.1
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 8.2e-50 201.8 292 46.2
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 6.9e-49 198.7 293 44.7
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 2.6e-48 196.8 276 47.8
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.6e-48 196.8 351 39.6
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.0e-47 194.9 256 44.5
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 4.2e-46 189.5 350 42.0
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 9.4e-46 188.3 144 66.0
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.7e-45 186.8 289 42.9
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.3e-44 183.7 344 40.7
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 5.1e-44 182.6 330 41.2
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 4.4e-43 179.5 254 50.8
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 2.8e-42 176.8 264 44.3
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 3.1e-41 173.3 293 42.3
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 2.9e-39 166.8 281 42.7
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 9.4e-38 161.8 214 50.0
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 9.1e-33 145.2 277 34.7
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 5.5e-30 136.0 277 33.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.6e-29 134.4 292 33.6
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.1e-29 134.0 94 70.2
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.6e-27 127.1 225 36.9
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 8.8e-20 102.1 149 40.9
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.1e-17 95.1 178 43.3
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 2.4e-17 94.0 180 34.4
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 4.1e-17 93.2 130 38.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 7.0e-17 92.4 228 34.2
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.6e-16 91.3 117 39.3
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.5e-16 90.1 60 73.3
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 7.7e-16 89.0 92 56.5
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.2e-13 81.6 166 39.8
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.8e-12 77.8 163 39.9
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 1.8e-12 77.8 251 33.9
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 9.8e-11 72.0 135 42.2
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.7e-08 63.9 114 41.2
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 3.3e-06 57.0 222 27.0


User provided reference genes

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