Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G015940 Citrullus lanatus HOM05D006679 ORTHO05D008461 2.6e-135 485.3 240 100.0
CsaV3_2G027800 Cucumis sativus L. HOM05D006679 ORTHO05D008461 1.4e-64 250.4 183 72.1
Sed0001224 Sechium edule HOM05D006679 ORTHO05D008461 1.7e-57 226.9 207 62.3
Cfa018555 Carpinus fangiana HOM05D006679 ORTHO05D008461 4.9e-49 198.7 202 54.5
Haze_17524 Corylus avellana HOM05D006679 ORTHO05D008461 3.2e-48 196.1 199 54.3
MELO3C010860.2 Cucumis melo HOM05D006679 ORTHO05D008461 3.0e-46 189.5 154 64.9
CANSAT25G3852 Cannabis sativa HOM05D006679 ORTHO05D008461 1.1e-43 181.0 201 52.7
Potri.014G029200 Populus trichocarpa HOM05D006679 ORTHO05D008461 4.0e-43 179.1 215 49.3
TWI56G1133 Tripterygium wilfordii HOM05D006679 ORTHO05D008461 3.4e-42 176.0 217 49.8
Manes.05G174002 Manihot esculenta HOM05D006679 ORTHO05D008461 1.3e-41 174.1 212 48.1
Glyma.06G039900 Glycine max HOM05D006679 ORTHO05D008461 1.7e-41 173.7 151 62.9
Glyma.04G038900 Glycine max HOM05D006679 ORTHO05D008461 2.2e-41 173.3 193 53.4
RcHm_v2.0_Chr6g0307941 Rosa chinensis HOM05D006679 ORTHO05D008461 3.8e-41 172.6 207 51.7
PGR083G0721 Punica granatum HOM05D006679 ORTHO05D008461 1.1e-40 171.0 208 48.1
Hma1.2p1_0982F.1_g244020 Hydrangea macrophylla HOM05D006679 ORTHO05D008461 1.4e-40 170.6 206 48.5
Sabra14G0020000 Salix brachista HOM05D006679 ORTHO05D008461 2.4e-40 169.9 202 48.5
GSVIVG01009494001 Vitis vinifera HOM05D006679 ORTHO05D008461 2.4e-40 169.9 215 48.4
FAN20G3165 Fragaria x ananassa HOM05D006679 ORTHO05D008461 3.2e-40 169.5 209 49.8
FvH4_2g34430 Fragaria vesca HOM05D006679 ORTHO05D008461 5.5e-40 168.7 209 49.8
FAN27G1719 Fragaria x ananassa HOM05D006679 ORTHO05D008461 5.5e-40 168.7 209 49.8
Gorai.009G211800 Gossypium raimondii HOM05D006679 ORTHO05D008461 9.3e-40 167.9 137 64.2
Ca_15948_v3 Cicer arietinum L. HOM05D006679 ORTHO05D008461 1.2e-39 167.5 151 59.6
Thecc.08G007200 Theobroma cacao HOM05D006679 ORTHO05D008461 1.2e-39 167.5 131 67.2
VMungo1309G2322 Vigna mungo HOM05D006679 ORTHO05D008461 1.6e-39 167.2 147 63.3
FAN15G2074 Fragaria x ananassa HOM05D006679 ORTHO05D008461 2.1e-39 166.8 209 49.8
MSTRG.1349 Avicennia marina HOM05D006679 ORTHO05D008461 2.7e-39 166.4 151 62.3
Sc15g0006140 Simmondsia chinensis HOM05D006679 ORTHO05D008461 2.7e-39 166.4 207 46.9
Cpa.g.sc49.20 Carica papaya HOM05D006679 ORTHO05D008461 3.5e-39 166.0 132 65.2
Peaxi162Scf00252g00067 Petunia axillaris HOM05D006679 ORTHO05D008461 3.5e-39 166.0 134 64.2
Sc15g0006210 Simmondsia chinensis HOM05D006679 ORTHO05D008461 3.5e-39 166.0 207 46.9
Atru.chr13.694 Acer truncatum HOM05D006679 ORTHO05D008461 4.6e-39 165.6 211 47.4
Gohir.A05G202400 Gossypium hirsutum HOM05D006679 ORTHO05D008461 7.9e-39 164.9 133 64.7
Gohir.D05G205500 Gossypium hirsutum HOM05D006679 ORTHO05D008461 7.9e-39 164.9 133 64.7
Phvul.009G065200 Phaseolus vulgaris HOM05D006679 ORTHO05D008461 7.9e-39 164.9 151 58.3
COL.COLO4_26510 Corchorus olitorius HOM05D006679 ORTHO05D008461 1.0e-38 164.5 142 60.6
SGA_v2.0_scaffold616G53207 Striga asiatica HOM05D006679 ORTHO05D008461 1.0e-38 164.5 136 62.5
Lj4A58T19 Lonicera japonica HOM05D006679 ORTHO05D008461 2.3e-38 163.3 145 60.7
Psat5g043080 Pisum sativum HOM05D006679 ORTHO05D008461 2.3e-38 163.3 203 49.3
Nn1g04857 Nelumbo nucifera HOM05D006679 ORTHO05D008461 3.0e-38 162.9 168 53.0
Nitab4.5_0003118g0010 Nicotiana tabacum HOM05D006679 ORTHO05D008461 3.0e-38 162.9 134 63.4
MD08G1101500 Malus domestica HOM05D006679 ORTHO05D008461 5.1e-38 162.2 208 48.1
Oeu017172.1 Olea europaea HOM05D006679 ORTHO05D008461 5.1e-38 162.2 136 61.0
SalBow7G0072 Salvia bowleyana HOM05D006679 ORTHO05D008461 5.1e-38 162.2 138 63.8
TAR376G0298 Trochodendron aralioides HOM05D006679 ORTHO05D008461 5.1e-38 162.2 134 64.2
Aqoxy6G01320 Aquilegia oxysepala HOM05D006679 ORTHO05D008461 8.7e-38 161.4 188 50.5
CAN.G371.2 Capsicum annuum HOM05D006679 ORTHO05D008461 1.1e-37 161.0 134 61.9
Eucgr.F00226 Eucalyptus grandis HOM05D006679 ORTHO05D008461 1.1e-37 161.0 130 66.2
FAN24G0165 Fragaria x ananassa HOM05D006679 ORTHO05D008461 1.5e-37 160.6 141 61.0
MD15G1082700 Malus domestica HOM05D006679 ORTHO05D008461 1.5e-37 160.6 213 46.9
Solyc04g078910.3 Solanum lycopersicum HOM05D006679 ORTHO05D008461 1.9e-37 160.2 134 61.9
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 3.3e-37 159.5 226 44.7
CSS0035367 Camellia sinensis var. sinensis HOM05D006679 ORTHO05D008461 3.3e-37 159.5 208 46.6
PGSC0003DMG400008013 Solanum tuberosum HOM05D006679 ORTHO05D008461 4.3e-37 159.1 134 61.2
BolC7t45852H Brassica oleracea HOM05D006679 ORTHO05D008461 1.3e-36 157.5 188 49.5
DCAR_019453 Daucus carota HOM05D006679 ORTHO05D008461 1.3e-36 157.5 137 59.9
Sopen04g032510 Solanum pennellii HOM05D006679 ORTHO05D008461 1.3e-36 157.5 134 61.2
TPR.G24167 Trifolium pratense HOM05D006679 ORTHO05D008461 1.3e-36 157.5 206 47.6
Actinidia22629 Actinidia chinensis HOM05D006679 ORTHO05D008461 2.1e-36 156.8 136 58.8
CSS0029638 Camellia sinensis var. sinensis HOM05D006679 ORTHO05D008461 2.1e-36 156.8 131 61.1
Lalb_Chr23g0267181 Lupinus albus HOM05D006679 ORTHO05D008461 2.1e-36 156.8 140 60.7
Cc10_g04150 Coffea canephora HOM05D006679 ORTHO05D008461 4.8e-36 155.6 133 60.2
Dinv39316 Davidia involucrata HOM05D006679 ORTHO05D008461 4.8e-36 155.6 201 47.3
CARHR007470 Cardamine hirsuta HOM05D006679 ORTHO05D008461 6.2e-36 155.2 178 51.1
Ciclev10002686m.g Citrus clementina HOM05D006679 ORTHO05D008461 6.2e-36 155.2 127 63.0
BraA03t14590Z Brassica rapa HOM05D006679 ORTHO05D008461 8.2e-36 154.8 178 50.0
A03p55310 Brassica napus HOM05D006679 ORTHO05D008461 1.1e-35 154.5 188 48.9
HanXRQChr14g0439631 Helianthus annuus HOM05D006679 ORTHO05D008461 1.8e-35 153.7 150 53.3
Ah.11g040620 Amaranthus hybridus HOM05D006679 ORTHO05D008461 2.4e-35 153.3 133 60.9
Rhsim06G0049900 Rhododendron simsii HOM05D006679 ORTHO05D008461 3.1e-35 152.9 210 43.8
AL1G17900 Arabidopsis lyrata HOM05D006679 ORTHO05D008461 4.0e-35 152.5 204 47.1
CiPaw.16G043700 Carya illinoinensis HOM05D006679 ORTHO05D008461 5.3e-35 152.1 143 55.9
PSO541G1985 Papaver somniferum HOM05D006679 ORTHO05D008461 6.9e-35 151.8 133 59.4
Aa31LG5G9280 Aethionema arabicum HOM05D006679 ORTHO05D008461 9.0e-35 151.4 194 48.5
Thhalv10026224m.g Eutrema salsugineum HOM05D006679 ORTHO05D008461 9.0e-35 151.4 214 43.9
Lsat_1_v5_gn_4_125640 Lactuca sativa HOM05D006679 ORTHO05D008461 1.2e-34 151.0 184 45.1
Nitab4.5_0000287g0350 Nicotiana tabacum HOM05D006679 ORTHO05D008461 2.0e-34 150.2 156 54.5
PSO675G1564 Papaver somniferum HOM05D006679 ORTHO05D008461 2.0e-34 150.2 133 58.6
Sp7g22460 Schrenkiella parvula HOM05D006679 ORTHO05D008461 4.5e-34 149.1 206 46.1
AT1G07700 Arabidopsis thaliana HOM05D006679 ORTHO05D008461 7.6e-34 148.3 133 59.4
Carub.0001s0705 Capsella rubella HOM05D006679 ORTHO05D008461 1.0e-33 147.9 133 58.6
HPP92_013116 Vanilla planifolia HOM05D006679 ORTHO05D008461 1.0e-33 147.9 125 59.2
Migut.C00578 Erythranthe guttata HOM05D006679 ORTHO05D008461 1.3e-33 147.5 164 52.4
HanXRQChr09g0267601 Helianthus annuus HOM05D006679 ORTHO05D008461 1.7e-33 147.1 126 58.7
Medtr3g101740 Medicago truncatula HOM05D006679 ORTHO05D008461 1.7e-33 147.1 138 60.1
vmacro21521 Vaccinium macrocarpon HOM05D006679 ORTHO05D008461 1.7e-33 147.1 134 56.0
EL10Ac1g02036 Beta vulgaris HOM05D006679 ORTHO05D008461 2.2e-33 146.7 199 46.2
ECA232G3126 Erigeron canadensis HOM05D006679 ORTHO05D008461 2.2e-33 146.7 138 54.3
ATR1102G028 Amborella trichopoda HOM05D006679 ORTHO05D008461 3.8e-33 146.0 124 60.5
Lj1g0004984 Lotus japonicus HOM05D006679 ORTHO05D008461 3.8e-33 146.0 135 57.0
Hund01732 Selenicereus undatus HOM05D006679 ORTHO05D008461 3.8e-33 146.0 126 58.7
CDE04G2190 Ceratophyllum demersum HOM05D006679 ORTHO05D008461 3.2e-32 142.9 129 58.1
unitig_19.g30011 Utricularia gibba HOM05D006679 ORTHO05D008461 1.2e-31 141.0 131 55.0
unitig_8.g5019 Utricularia gibba HOM05D006679 ORTHO05D008461 1.2e-31 141.0 131 55.0
Zm00001eb244540 Zea mays HOM05D006679 ORTHO05D008461 4.6e-31 139.0 126 55.6
arahy.Tifrunner.gnm1.ann1.WQ97CK Arachis hypogaea HOM05D006679 ORTHO05D008461 6.0e-31 138.7 132 59.1
AUR62036763 Chenopodium quinoa HOM05D006679 ORTHO05D008461 5.1e-30 135.6 117 61.5
QL02p004799 Quercus lobata HOM05D006679 ORTHO05D008461 5.1e-30 135.6 168 45.8
SEGI_11121 Sequoiadendron giganteum HOM05D006679 ORTHO05D008461 1.1e-29 134.4 143 48.3
Os02g0567100 Oryza sativa ssp. japonica HOM05D006679 ORTHO05D008461 2.2e-28 130.2 122 53.3
BcaC06g32882 Brassica carinata HOM05D006679 ORTHO05D008461 4.8e-28 129.0 128 58.6
AUR62013842 Chenopodium quinoa HOM05D006679 ORTHO05D008461 8.2e-28 128.3 114 60.5
Mapoly0014s0177 Marchantia polymorpha HOM05D006679 ORTHO05D008461 4.5e-26 122.5 128 48.4
arahy.Tifrunner.gnm1.ann1.XE9EJK Arachis hypogaea HOM05D006679 ORTHO05D008461 1.7e-25 120.6 132 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4629 Anthoceros agrestis HOM05D006679 ORTHO05D008461 5.5e-24 115.5 123 51.2
Pp3c10_18810 Physcomitrium patens HOM05D006679 ORTHO05D008461 2.7e-23 113.2 124 46.0
Actinidia23275 Actinidia chinensis HOM05D006679 ORTHO05D008461 6.7e-22 108.6 133 45.9
Pp3c4_3900 Physcomitrium patens HOM05D006679 ORTHO05D008461 6.7e-22 108.6 131 43.5
Duzib041G0515 Durio zibethinus HOM05D006679 ORTHO05D008461 1.9e-21 107.1 102 55.9
Prupe.1G435400 Prunus persica HOM05D006679 ORTHO05D008461 4.3e-21 105.9 171 41.5
THA.LOC104803677 Tarenaya hassleriana HOM05D006679 ORTHO05D008461 5.7e-21 105.5 98 58.2
arahy.Tifrunner.gnm1.ann1.Q4KY5Z Arachis hypogaea HOM05D006679 ORTHO05D008461 3.8e-17 92.8 103 51.5
RcHm_v2.0_Chr2g0138861 Rosa chinensis HOM05D006679 ORTHO05D008461 2.1e-15 87.0 54 75.9
C06p07550 Brassica napus HOM05D006679 ORTHO05D008461 2.6e-13 80.1 41 90.2
DCAR_022432 Daucus carota HOM05D006679 ORTHO05D008461 2.8e-12 76.6 94 44.7
SEGI_22557 Sequoiadendron giganteum HOM05D006679 ORTHO05D008461 1.3e-09 67.8 80 41.2
CsaV3_2G027810 Cucumis sativus L. HOM05D006679 ORTHO05D173770 2.9e-09 66.6 46 71.7
arahy.Tifrunner.gnm1.ann1.FJZ5VR Arachis hypogaea HOM05D006679 ORTHO05D008461 1.4e-08 64.3 63 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1297 Anthoceros agrestis HOM05D006679 ORTHO05D008461 9.4e-08 61.6 56 46.4
RcHm_v2.0_Chr2g0138871 Rosa chinensis HOM05D006679 ORTHO05D008461 3.0e-06 56.6 102 40.2


User provided reference genes

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