Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 2.1e-123 445.7 218 100.0
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.2e-99 366.7 191 92.1
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.1e-99 365.9 191 92.1
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.1e-86 322.8 191 80.1
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 2.7e-86 322.4 192 82.8
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.2e-55 218.8 198 58.6
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 2.7e-54 216.1 196 56.1
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.9e-52 209.9 198 56.6
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 1.9e-52 209.9 199 56.3
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.3e-52 209.1 200 57.0
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.1e-51 206.5 195 55.4
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 8.1e-51 204.5 200 53.0
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 8.1e-51 204.5 200 53.0
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 1.1e-50 204.1 197 55.3
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 2.4e-50 203.0 198 54.0
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.3e-50 201.8 200 52.5
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 2.0e-49 199.9 195 53.8
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.0e-49 199.9 195 54.4
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 3.4e-49 199.1 210 53.8
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 1.0e-48 197.6 195 53.8
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 1.0e-48 197.6 195 53.8
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 2.9e-48 196.1 196 55.1
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.9e-47 193.4 197 52.8
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.2e-46 190.7 197 53.3
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.2e-46 190.7 197 53.3
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.1e-46 189.9 198 52.5
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 2.1e-46 189.9 223 50.7
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 7.9e-46 188.0 208 50.0
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 7.9e-46 188.0 201 53.2
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 7.9e-46 188.0 206 50.5
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.3e-45 186.4 196 52.6
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.1e-45 185.3 199 50.3
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.1e-44 184.1 199 50.3
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.5e-44 183.7 204 48.5
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.5e-44 183.0 199 49.7
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 4.3e-44 182.2 200 51.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 5.7e-44 181.8 194 53.6
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 5.7e-44 181.8 194 53.6
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 7.4e-44 181.4 197 51.8
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.7e-43 179.1 202 51.5
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.1e-42 177.6 194 48.5
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.8e-42 176.8 202 51.5
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 5.3e-42 175.3 197 48.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 6.9e-42 174.9 195 51.8
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 9.0e-42 174.5 194 52.6
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 2.0e-41 173.3 195 49.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 2.6e-41 172.9 198 49.5
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 2.6e-41 172.9 197 45.2
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 3.4e-41 172.6 206 46.6
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 5.9e-41 171.8 197 50.8
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.0e-40 171.0 197 46.7
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.3e-40 170.6 194 46.9
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 1.7e-40 170.2 142 59.9
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.4e-39 167.2 195 46.7
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.9e-39 166.8 194 47.4
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.5e-39 165.2 194 46.9
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 5.5e-39 165.2 194 48.5
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 9.3e-39 164.5 194 47.4
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.6e-38 162.5 210 43.8
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 2.3e-37 159.8 195 45.6
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 6.7e-37 158.3 202 47.0
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.1e-36 157.5 194 45.9
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 9.7e-36 154.5 219 42.9
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.2e-35 153.3 191 44.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 3.7e-35 152.5 200 46.0
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.7e-35 152.5 191 42.9
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 4.8e-35 152.1 207 45.4
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 8.2e-35 151.4 199 46.2
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 6.9e-34 148.3 222 39.6
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.0e-33 146.7 194 40.7
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.5e-33 145.6 192 42.2
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.2e-32 143.3 216 40.7
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.9e-32 142.9 216 41.7
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 6.5e-32 141.7 195 43.6
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 2.5e-31 139.8 210 40.5
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 2.5e-31 139.8 193 42.5
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 4.2e-31 139.0 197 41.6
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 5.5e-31 138.7 197 44.2
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 6.1e-30 135.2 204 42.2
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 8.8e-29 131.3 195 39.0
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.1e-28 131.0 177 46.3
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.0e-28 130.2 200 42.0
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 3.3e-28 129.4 195 42.1
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.1e-26 124.4 200 41.5
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.4e-26 124.0 196 41.3
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 2.4e-26 123.2 194 38.7
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 6.9e-26 121.7 198 40.4
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.2e-25 120.9 162 43.2
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 7.7e-25 118.2 145 48.3
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.7e-24 117.1 125 48.8
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.9e-24 116.3 196 42.9
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.1e-23 114.4 169 42.6
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 2.5e-23 113.2 211 40.8
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 4.2e-23 112.5 193 38.3
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.2e-22 110.9 202 38.6
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.6e-22 110.5 152 43.4
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 4.7e-22 109.0 108 54.6
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.0e-21 107.8 185 37.3
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 2.3e-21 106.7 186 36.6
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 6.7e-21 105.1 195 40.0
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.5e-20 104.0 183 37.7
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 2.0e-20 103.6 191 35.6
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 2.6e-20 103.2 185 36.2
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 5.7e-20 102.1 181 34.3
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 5.7e-20 102.1 181 34.3
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 2.2e-19 100.1 189 37.6
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 3.7e-19 99.4 181 37.6
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 6.3e-19 98.6 185 34.6
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.1e-18 97.8 187 35.8
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 2.4e-18 96.7 185 34.6
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.6e-17 93.2 201 33.8
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 7.2e-15 85.1 209 34.4
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 7.2e-15 85.1 209 34.4
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 4.0e-13 79.3 113 41.6
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.5e-12 77.4 182 29.1
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 5.7e-12 75.5 297 25.6
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 4.8e-11 72.4 155 36.1
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 6.3e-11 72.0 153 35.3
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 8.2e-11 71.6 153 34.6
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.8e-10 70.5 146 30.8
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 5.5e-07 58.9 137 34.3


User provided reference genes

Program Settings