Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G013540 Citrullus lanatus HOM05D001431 ORTHO05D001268 1.5e-83 312.8 155 100.0
MELO3C011280.2 Cucumis melo HOM05D001431 ORTHO05D001268 5.2e-52 208.0 164 75.0
CsaV3_2G032300 Cucumis sativus L. HOM05D001431 ORTHO05D001268 3.8e-50 201.8 139 79.9
Sed0007135 Sechium edule HOM05D001431 ORTHO05D001268 5.4e-33 144.8 159 56.0
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 3.5e-16 89.0 124 38.7
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 1.8e-15 86.7 146 39.0
FAN27G3025 Fragaria x ananassa HOM05D001431 ORTHO05D001268 5.1e-15 85.1 111 40.5
FvH4_2g28310 Fragaria vesca HOM05D001431 ORTHO05D001268 8.7e-15 84.3 111 39.6
RcHm_v2.0_Chr6g0297221 Rosa chinensis HOM05D001431 ORTHO05D001268 1.9e-14 83.2 116 40.5
FAN20G3221 Fragaria x ananassa HOM05D001431 ORTHO05D001268 7.4e-14 81.3 111 38.7
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 1.3e-13 80.5 106 43.4
CsaV3_1G028510 Cucumis sativus L. HOM05D001431 ORTHO05D001268 3.7e-13 79.0 125 41.6
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 1.1e-12 77.4 123 43.1
ClCG06G012050 Citrullus lanatus HOM05D001431 ORTHO05D001268 3.1e-12 75.9 122 40.2
MD15G1130700 Malus domestica HOM05D001431 ORTHO05D001268 3.1e-12 75.9 98 44.9
Prupe.1G486100 Prunus persica HOM05D001431 ORTHO05D001268 5.3e-12 75.1 105 40.0
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 5.3e-12 75.1 111 38.7
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 1.5e-11 73.6 118 39.8
Cpa.g.sc187.26 Carica papaya HOM05D001431 ORTHO05D001268 2.0e-11 73.2 114 40.4
Manes.16G126000 Manihot esculenta HOM05D001431 ORTHO05D001268 2.0e-11 73.2 105 40.0
QL02p091314 Quercus lobata HOM05D001431 ORTHO05D001268 2.6e-11 72.8 115 39.1
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 2.6e-11 72.8 108 40.7
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 3.4e-11 72.4 116 41.4
TWI34G1362 Tripterygium wilfordii HOM05D001431 ORTHO05D001268 1.3e-10 70.5 121 38.8
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 8.5e-10 67.8 158 35.4
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 8.5e-10 67.8 119 31.1
Cfa013105 Carpinus fangiana HOM05D024967 ORTHO05D001268 1.4e-09 67.0 123 33.3
AUR62041452 Chenopodium quinoa HOM05D001431 ORTHO05D001268 1.4e-09 67.0 91 39.6
Lsat_1_v5_gn_7_47921 Lactuca sativa HOM05D001431 ORTHO05D001268 1.4e-09 67.0 105 36.2
Manes.03G011900 Manihot esculenta HOM05D001431 ORTHO05D001268 1.4e-09 67.0 119 34.5
Atru.chr7.2499 Acer truncatum HOM05D001431 ORTHO05D001268 2.5e-09 66.2 150 30.7
Ciclev10010338m.g Citrus clementina HOM05D001431 ORTHO05D001268 2.5e-09 66.2 108 35.2
Hma1.2p1_0949F.1_g240600 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 2.5e-09 66.2 107 38.3
CiPaw.07G227000 Carya illinoinensis HOM05D001431 ORTHO05D001268 3.2e-09 65.9 130 33.1
Sed0026439 Sechium edule HOM05D001431 ORTHO05D001268 5.5e-09 65.1 106 37.7
AUR62011255 Chenopodium quinoa HOM05D001431 ORTHO05D001268 7.2e-09 64.7 91 38.5
Gohir.A06G099800 Gossypium hirsutum HOM05D001431 ORTHO05D001268 7.2e-09 64.7 158 34.8
Hma1.2p1_1784F.1_g302160 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 7.2e-09 64.7 107 37.4
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 9.4e-09 64.3 158 34.8
MD09G1036100 Malus domestica HOM05D001431 ORTHO05D001268 9.4e-09 64.3 120 35.8
Haze_21471 Corylus avellana HOM05D024967 ORTHO05D001268 1.2e-08 63.9 124 35.5
Eucgr.C02728 Eucalyptus grandis HOM05D001431 ORTHO05D001268 1.2e-08 63.9 110 39.1
Eucgr.C02729 Eucalyptus grandis HOM05D001431 ORTHO05D001268 1.6e-08 63.5 113 38.1
Actinidia14101 Actinidia chinensis HOM05D001431 ORTHO05D001268 2.1e-08 63.2 64 42.2
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 2.1e-08 63.2 117 37.6
Gohir.A06G050000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 2.7e-08 62.8 111 36.0
arahy.Tifrunner.gnm1.ann1.KMWM4V Arachis hypogaea HOM05D001431 ORTHO05D001268 3.6e-08 62.4 144 30.6
Psat4g033120 Pisum sativum HOM05D001431 ORTHO05D001268 3.6e-08 62.4 121 34.7
Actinidia26350 Actinidia chinensis HOM05D000320 ORTHO05D000532 4.6e-08 62.0 69 46.4
Haze_21462 Corylus avellana HOM05D024967 ORTHO05D001268 4.6e-08 62.0 124 34.7
Ah.09g223880 Amaranthus hybridus HOM05D001431 ORTHO05D001268 6.1e-08 61.6 104 37.5
Glyma.04G064200 Glycine max HOM05D030354 ORTHO05D029741 6.1e-08 61.6 119 33.6
Sed0005869 Sechium edule HOM05D001431 ORTHO05D001268 6.1e-08 61.6 118 37.3
Gorai.010G056200 Gossypium raimondii HOM05D001431 ORTHO05D001268 7.9e-08 61.2 111 35.1
FAN24G3016 Fragaria x ananassa HOM05D001431 ORTHO05D001268 1.0e-07 60.8 109 32.1
Ah.14g078760 Amaranthus hybridus HOM05D001431 ORTHO05D001268 1.4e-07 60.5 105 38.1
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 1.4e-07 60.5 66 47.0
ECA240G3019 Erigeron canadensis HOM05D001431 ORTHO05D001268 1.8e-07 60.1 132 33.3
MBI15_g10642_MAGBIO Magnolia biondii HOM05D001431 ORTHO05D001268 1.8e-07 60.1 122 34.4
Medtr4g116530 Medicago truncatula HOM05D001431 ORTHO05D001268 1.8e-07 60.1 72 43.1
Lalb_Chr07g0179511 Lupinus albus HOM05D001431 ORTHO05D001268 2.3e-07 59.7 87 37.9
Psat0ss25082g0080 Pisum sativum HOM05D001431 ORTHO05D001268 2.3e-07 59.7 111 35.1
TPR.G15780 Trifolium pratense HOM05D001431 ORTHO05D001268 2.3e-07 59.7 117 34.2
Duzib187G1758 Durio zibethinus HOM05D001431 ORTHO05D001268 3.0e-07 59.3 125 37.6
QL02p091271 Quercus lobata HOM05D001431 ORTHO05D001268 3.0e-07 59.3 115 35.7
MD17G1037700 Malus domestica HOM05D001431 ORTHO05D001268 3.9e-07 58.9 110 36.4
CSS0009490 Camellia sinensis var. sinensis HOM05D001431 ORTHO05D001268 5.1e-07 58.5 108 35.2
Glyma.06G065400 Glycine max HOM05D030354 ORTHO05D029741 5.1e-07 58.5 105 36.2
Peaxi162Scf00108g00003 Petunia axillaris HOM05D001431 ORTHO05D001268 5.1e-07 58.5 112 34.8
Phvul.009G209600 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 5.1e-07 58.5 121 37.2
VMungo1309G2763 Vigna mungo HOM05D001431 ORTHO05D001268 5.1e-07 58.5 118 35.6
MSTRG.6092 Avicennia marina HOM05D001431 ORTHO05D001268 6.7e-07 58.2 121 34.7
Atru.chr7.261 Acer truncatum HOM05D001431 ORTHO05D001268 8.8e-07 57.8 124 30.6
Rhsim08G0056500 Rhododendron simsii HOM05D001431 ORTHO05D001268 8.8e-07 57.8 92 37.0
Cfa020891 Carpinus fangiana HOM05D001431 ORTHO05D001268 1.1e-06 57.4 130 35.4
COL.COLO4_24101 Corchorus olitorius HOM05D001431 ORTHO05D001268 1.1e-06 57.4 118 34.7
HanXRQChr03g0064021 Helianthus annuus HOM05D001431 ORTHO05D001268 1.1e-06 57.4 104 35.6
PSO063G3193 Papaver somniferum HOM05D001431 ORTHO05D001268 1.1e-06 57.4 75 45.3
EL10Ac8g18816 Beta vulgaris HOM05D001431 ORTHO05D001268 1.5e-06 57.0 92 35.9
Cfa019090 Carpinus fangiana HOM05D001431 ORTHO05D001268 1.5e-06 57.0 104 36.5
CDE10G0680 Ceratophyllum demersum HOM05D001431 ORTHO05D001268 1.5e-06 57.0 134 32.8
Thhalv10005131m.g Eutrema salsugineum HOM05D001431 ORTHO05D001268 1.5e-06 57.0 105 39.0
PSO832G1465 Papaver somniferum HOM05D001431 ORTHO05D001268 1.5e-06 57.0 75 45.3
Ca_27061_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 2.0e-06 56.6 110 33.6
Eucgr.C00435 Eucalyptus grandis HOM05D001431 ORTHO05D001268 2.0e-06 56.6 127 33.9
Nitab4.5_0011752g0010 Nicotiana tabacum HOM05D001431 ORTHO05D001268 2.0e-06 56.6 71 39.4
Peaxi162Scf01184g00111 Petunia axillaris HOM05D001431 ORTHO05D001268 2.0e-06 56.6 138 31.9
TPR.G22802 Trifolium pratense HOM05D001431 ORTHO05D001268 2.0e-06 56.6 110 34.5
Glyma.15G202100 Glycine max HOM05D001431 ORTHO05D001268 2.5e-06 56.2 105 35.2
HanXRQChr06g0181721 Helianthus annuus HOM05D001431 ORTHO05D001268 2.5e-06 56.2 129 34.1
Peaxi162Scf01184g00110 Petunia axillaris HOM05D001431 ORTHO05D001268 2.5e-06 56.2 88 37.5
Potri.006G190100 Populus trichocarpa HOM05D001431 ORTHO05D001268 2.5e-06 56.2 123 30.9
Potri.018G114200 Populus trichocarpa HOM05D001431 ORTHO05D001268 2.5e-06 56.2 125 32.0
CARHR188250 Cardamine hirsuta HOM05D001431 ORTHO05D001268 3.3e-06 55.8 114 36.8
Glyma.13G157400 Glycine max HOM05D001431 ORTHO05D001268 3.3e-06 55.8 111 35.1
Lju41C33T14 Lonicera japonica HOM05D001431 ORTHO05D001268 3.3e-06 55.8 100 35.0
Manes.14G067900 Manihot esculenta HOM05D001431 ORTHO05D001268 3.3e-06 55.8 99 37.4
Sabra18G0097100 Salix brachista HOM05D001431 ORTHO05D001268 3.3e-06 55.8 106 32.1
Sp2g22300 Schrenkiella parvula HOM05D001431 ORTHO05D001268 3.3e-06 55.8 103 36.9
Ciclev10010491m.g Citrus clementina HOM05D001431 ORTHO05D001268 4.3e-06 55.5 118 31.4
Haze_07487 Corylus avellana HOM05D001431 ORTHO05D001268 4.3e-06 55.5 105 37.1
Peaxi162Scf00391g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 4.3e-06 55.5 63 42.9
BcaNung06283 Brassica carinata HOM05D001431 ORTHO05D001268 5.7e-06 55.1 65 44.6
Lj6g0025598 Lotus japonicus HOM05D001431 ORTHO05D001268 5.7e-06 55.1 120 35.0
Nn8g39717 Nelumbo nucifera HOM05D001431 ORTHO05D001268 5.7e-06 55.1 101 36.6
C09p06900 Brassica napus HOM05D001431 ORTHO05D001268 7.4e-06 54.7 65 44.6
BolC9t53610H Brassica oleracea HOM05D001431 ORTHO05D001268 7.4e-06 54.7 65 44.6
CANSAT11G0265 Cannabis sativa HOM05D001431 ORTHO05D001268 7.4e-06 54.7 61 44.3
CiPaw.15G181700 Carya illinoinensis HOM05D001431 ORTHO05D001268 7.4e-06 54.7 116 34.5
CDE10G0322 Ceratophyllum demersum HOM05D000154 ORTHO05D000092 7.4e-06 54.7 127 33.9
Oeu042713.1 Olea europaea HOM05D001431 ORTHO05D001268 9.7e-06 54.3 132 32.6
Rhsim03G0254500 Rhododendron simsii HOM05D001431 ORTHO05D001268 9.7e-06 54.3 109 35.8
Sed0006170 Sechium edule HOM05D001431 ORTHO05D001268 9.7e-06 54.3 121 33.1
GSVIVG01007791001 Vitis vinifera HOM05D001431 ORTHO05D001268 9.7e-06 54.3 101 36.6


User provided reference genes

Program Settings