Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G012890 Citrullus lanatus HOM05D000175 ORTHO05D010751 1.7e-187 660.2 701 100.0
MD14G1075600 Malus domestica HOM05D000175 ORTHO05D010751 4.4e-66 256.9 270 56.7
Cfa013209 Carpinus fangiana HOM05D000175 ORTHO05D010751 1.5e-50 205.3 213 47.9
Haze_21622 Corylus avellana HOM05D000175 ORTHO05D010751 2.6e-50 204.5 213 47.9
Prupe.1G189500 Prunus persica HOM05D000175 ORTHO05D010751 1.3e-46 192.2 257 49.8
QL12p031294 Quercus lobata HOM05D000175 ORTHO05D010751 4.1e-43 180.6 144 60.4
CiPaw.07G217800 Carya illinoinensis HOM05D000175 ORTHO05D010751 2.1e-39 168.3 147 57.1
Dinv29350 Davidia involucrata HOM05D000175 ORTHO05D010751 1.9e-37 161.8 130 61.5
Hma1.2p1_0003F.1_g003660 Hydrangea macrophylla HOM05D000175 ORTHO05D010751 3.3e-37 161.0 131 60.3
Actinidia13289 Actinidia chinensis HOM05D000175 ORTHO05D010751 9.7e-37 159.5 160 52.5
TWI32G0171 Tripterygium wilfordii HOM05D000175 ORTHO05D010751 1.0e-33 149.4 138 52.2
TAR629G1788 Trochodendron aralioides HOM05D000175 ORTHO05D010751 1.1e-32 146.0 142 52.1
Thecc.09G144200 Theobroma cacao HOM05D000175 ORTHO05D010751 1.9e-32 145.2 145 48.3
Cc08_g08310 Coffea canephora HOM05D000175 ORTHO05D010751 5.5e-32 143.7 144 52.1
COL.COLO4_24065 Corchorus olitorius HOM05D000175 ORTHO05D010751 2.1e-31 141.7 153 48.4
Cpa.g.sc91.9 Carica papaya HOM05D000175 ORTHO05D010751 7.9e-31 139.8 145 49.0
DCAR_022873 Daucus carota HOM05D000175 ORTHO05D010751 1.8e-30 138.7 265 37.7
TAR636G0303 Trochodendron aralioides HOM05D000175 ORTHO05D010751 3.9e-30 137.5 146 50.7
Manes.03G064701 Manihot esculenta HOM05D000175 ORTHO05D010751 6.7e-30 136.7 154 46.8
CDE06G1344 Ceratophyllum demersum HOM05D000175 ORTHO05D010751 9.7e-29 132.9 230 35.2
Gohir.D06G047801 Gossypium hirsutum HOM05D000175 ORTHO05D010751 1.7e-28 132.1 152 44.7
Gorai.010G053600 Gossypium raimondii HOM05D000175 ORTHO05D010751 1.7e-28 132.1 152 44.7
THA.LOC104820394 Tarenaya hassleriana HOM05D000175 ORTHO05D010751 1.8e-27 128.6 183 39.3
Eucgr.H04959 Eucalyptus grandis HOM05D000175 ORTHO05D010751 2.4e-27 128.3 149 48.3
Gohir.A11G252600 Gossypium hirsutum HOM05D000175 ORTHO05D010751 4.1e-27 127.5 145 44.8
SGA_v2.0_scaffold27G11490 Striga asiatica HOM05D000175 ORTHO05D010751 5.0e-25 120.6 109 54.1
PGR102G0839 Punica granatum HOM05D000175 ORTHO05D010751 8.5e-25 119.8 154 42.2
CANSAT80G2846 Cannabis sativa HOM05D000175 ORTHO05D010751 4.2e-24 117.5 133 45.9
MSTRG.11739 Avicennia marina HOM05D000175 ORTHO05D010751 1.2e-23 115.9 136 46.3
MBI17_g42672_MAGBIO Magnolia biondii HOM05D000175 ORTHO05D010751 2.7e-23 114.8 141 44.0
Rhsim02G0187200 Rhododendron simsii HOM05D000175 ORTHO05D010751 3.6e-23 114.4 156 42.3
Migut.A00274 Erythranthe guttata HOM05D000175 ORTHO05D010751 3.0e-22 111.3 107 52.3
Duzib150G0592 Durio zibethinus HOM05D000175 ORTHO05D010751 5.1e-22 110.5 99 53.5
SalBow4G3013 Salvia bowleyana HOM05D000175 ORTHO05D010751 7.4e-21 106.7 109 49.5
Aqoxy1G00639 Aquilegia oxysepala HOM05D000175 ORTHO05D010751 3.7e-20 104.4 133 42.9
SHI18614 Sapria himalayana HOM05D000175 ORTHO05D010751 6.3e-20 103.6 136 41.9
Dinv35884 Davidia involucrata HOM05D000175 ORTHO05D010751 8.2e-20 103.2 111 46.8
Sc12g0005540 Simmondsia chinensis HOM05D000175 ORTHO05D010751 1.1e-19 102.8 142 42.3
Duzib187G1137 Durio zibethinus HOM05D000175 ORTHO05D010751 1.7e-12 79.0 144 32.6
Nn2g14219 Nelumbo nucifera HOM05D000175 ORTHO05D010751 2.0e-10 72.0 72 43.1
Gohir.A09G065401 Gossypium hirsutum HOM05D000175 ORTHO05D010751 1.6e-07 62.4 75 42.7


User provided reference genes

Program Settings