Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 2.6e-102 375.6 212 100.0
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 1.3e-98 363.2 212 96.7
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 8.6e-98 360.5 211 96.7
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 9.9e-86 320.5 212 87.7
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 4.8e-64 248.4 212 66.0
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 2.6e-62 242.7 211 65.9
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 7.6e-62 241.1 212 66.0
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 1.7e-61 240.0 215 65.1
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 2.2e-61 239.6 212 64.6
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 1.1e-60 237.3 204 64.7
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 1.4e-60 236.9 210 64.3
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.4e-60 236.9 212 64.2
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 1.4e-60 236.9 210 64.3
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 4.2e-60 235.3 214 64.5
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.2e-59 233.8 215 62.8
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.6e-59 231.9 212 63.2
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 4.6e-59 231.9 210 62.4
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 6.1e-59 231.5 212 63.7
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 6.1e-59 231.5 213 62.9
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 6.1e-59 231.5 212 62.7
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 1.8e-58 229.9 212 63.2
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 3.0e-58 229.2 211 61.1
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 3.0e-58 229.2 212 62.3
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 1.5e-57 226.9 209 62.7
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 4.3e-57 225.3 208 63.0
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 5.7e-57 224.9 208 64.4
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 7.4e-57 224.6 211 62.1
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 9.7e-57 224.2 214 60.7
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 9.7e-57 224.2 213 60.1
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 1.3e-56 223.8 212 60.8
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.2e-56 223.0 213 61.0
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 2.8e-56 222.6 212 61.3
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 4.8e-56 221.9 213 60.6
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 1.1e-55 220.7 215 60.9
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 3.1e-55 219.2 213 60.1
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 9.0e-55 217.6 215 60.0
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 9.0e-55 217.6 213 61.5
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.2e-54 217.2 213 59.2
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.5e-54 216.9 219 60.7
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 1.5e-54 216.9 215 60.5
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 1.0e-53 214.2 210 56.7
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 1.0e-53 214.2 208 61.1
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.9e-53 212.6 209 61.2
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 5.0e-53 211.8 213 58.7
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.9e-52 209.9 208 60.6
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 2.5e-52 209.5 209 58.4
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 5.5e-52 208.4 214 59.8
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 5.5e-52 208.4 213 59.6
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.6e-51 206.8 200 63.5
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 6.1e-51 204.9 211 56.9
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.9e-50 202.2 214 57.0
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 3.9e-50 202.2 219 56.6
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 6.7e-50 201.4 213 56.8
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 3.3e-49 199.1 197 56.9
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 4.3e-49 198.7 211 56.4
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 7.4e-49 198.0 213 56.8
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 9.7e-49 197.6 214 59.8
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 2.2e-48 196.4 212 54.2
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 2.8e-48 196.1 176 63.6
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.4e-47 193.0 210 52.9
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 2.4e-47 193.0 209 55.0
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 4.1e-47 192.2 209 54.5
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 4.1e-47 192.2 210 52.4
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 2.0e-46 189.9 210 52.4
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 2.0e-46 189.9 215 50.2
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.0e-46 189.9 211 49.8
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 3.4e-46 189.1 222 52.3
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.4e-46 189.1 211 50.2
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 4.5e-46 188.7 202 57.4
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 1.0e-45 187.6 209 51.7
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 1.0e-45 187.6 212 52.8
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.0e-45 187.6 211 53.1
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 1.7e-45 186.8 205 52.2
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 1.7e-45 186.8 208 58.2
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 3.2e-44 182.6 209 50.7
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.2e-43 180.6 210 49.0
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 2.1e-43 179.9 211 52.1
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 2.7e-43 179.5 209 50.7
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.7e-43 179.5 209 49.3
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 2.7e-43 179.5 211 52.6
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.6e-43 179.1 211 49.8
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 3.6e-43 179.1 211 50.2
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 6.1e-43 178.3 213 47.9
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 6.1e-43 178.3 212 48.6
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 7.9e-43 177.9 222 50.9
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 1.0e-42 177.6 209 51.7
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.4e-42 177.2 211 52.1
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 1.8e-42 176.8 211 49.8
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 3.0e-42 176.0 211 47.9
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 3.9e-42 175.6 209 48.8
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 6.7e-42 174.9 204 51.0
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 6.7e-42 174.9 211 51.2
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 7.4e-41 171.4 210 47.6
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 9.7e-41 171.0 212 49.5
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 2.8e-40 169.5 210 47.1
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 3.7e-40 169.1 212 51.9
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 1.8e-39 166.8 217 43.8
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 3.1e-39 166.0 211 49.8
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 3.1e-39 166.0 211 45.5
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 5.3e-39 165.2 211 49.8
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.2e-38 164.1 208 50.0
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 1.0e-37 161.0 211 47.4
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.0e-37 161.0 209 47.8
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 1.3e-37 160.6 163 57.7
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 3.8e-37 159.1 220 42.3
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.0e-37 158.7 213 44.6
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 6.5e-37 158.3 205 44.4
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 8.5e-37 157.9 200 48.5
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 1.1e-36 157.5 216 46.8
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.9e-36 156.8 213 48.8
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.2e-36 155.6 214 43.9
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 4.2e-36 155.6 217 43.8
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.2e-35 154.1 217 43.3
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 1.6e-35 153.7 208 48.1
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 2.1e-35 153.3 212 48.6
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 6.1e-35 151.8 206 45.1
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 3.3e-33 146.0 197 44.2
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 1.7e-32 143.7 214 41.6
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 6.3e-32 141.7 197 43.1
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.4e-31 140.6 215 46.0
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.1e-31 139.4 207 45.4
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.6e-30 137.1 205 42.0
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 2.0e-30 136.7 206 41.7
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 2.7e-30 136.3 195 45.1
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 3.5e-30 136.0 215 41.4
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 4.5e-30 135.6 195 44.1
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 4.5e-30 135.6 195 44.1
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 4.5e-30 135.6 138 55.8
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 7.7e-30 134.8 195 44.6
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 2.9e-29 132.9 194 43.3
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.8e-29 132.5 200 44.0
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 5.5e-28 128.6 190 43.7
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 9.4e-28 127.9 139 56.1
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 1.2e-27 127.5 198 40.9
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.6e-27 125.9 221 42.5
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 3.6e-27 125.9 146 52.1
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 6.1e-27 125.2 213 40.4
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 8.0e-27 124.8 214 39.3
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.0e-26 124.4 217 39.6
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 1.4e-26 124.0 214 39.7
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 5.2e-26 122.1 207 40.1
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.7e-25 118.6 138 54.3
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 3.1e-23 112.8 213 39.9
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.6e-22 110.5 216 39.4
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 3.5e-22 109.4 205 40.0
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 5.9e-22 108.6 115 52.2
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 1.9e-20 103.6 212 36.3
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 4.2e-20 102.4 213 36.2
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 7.2e-20 101.7 138 44.2
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.2e-19 100.9 209 38.8
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 2.7e-19 99.8 118 48.3
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 1.5e-09 67.4 86 45.3
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 1.1e-07 61.2 84 50.0


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