Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G011490 Citrullus lanatus HOM05D007577 ORTHO05D002366 6.2e-65 250.8 136 100.0
CsaV3_2G030080 Cucumis sativus L. HOM05D007577 ORTHO05D002366 3.4e-39 165.2 157 65.6
MELO3C011066.2 Cucumis melo HOM05D007577 ORTHO05D002366 4.5e-39 164.9 158 65.2
Sed0009750 Sechium edule HOM05D007577 ORTHO05D002366 1.3e-30 136.7 163 53.4
Sed0013944 Sechium edule HOM05D007577 ORTHO05D002366 6.5e-30 134.4 161 59.0
CiPaw.07G168400 Carya illinoinensis HOM05D007577 ORTHO05D002366 1.0e-22 110.5 147 51.0
QL09p017111 Quercus lobata HOM05D007577 ORTHO05D002366 1.3e-22 110.2 141 48.2
Haze_22347 Corylus avellana HOM05D007577 ORTHO05D002366 2.7e-20 102.4 152 45.4
Manes.02G147100 Manihot esculenta HOM05D007577 ORTHO05D002366 2.3e-19 99.4 136 48.5
Thecc.08G067500 Theobroma cacao HOM05D007577 ORTHO05D002366 5.1e-19 98.2 144 45.8
Duzib041G0196 Durio zibethinus HOM05D007577 ORTHO05D002366 1.7e-17 93.2 146 41.1
Sabra05G0120900 Salix brachista HOM05D007577 ORTHO05D002366 1.7e-17 93.2 136 47.8
CiPaw.08G053900 Carya illinoinensis HOM05D007577 ORTHO05D002366 2.2e-17 92.8 150 44.0
MBI06_g18795_MAGBIO Magnolia biondii HOM05D007577 ORTHO05D002366 3.7e-17 92.0 133 46.6
Manes.18G061400 Manihot esculenta HOM05D007577 ORTHO05D002366 4.8e-17 91.7 136 44.9
Peaxi162Scf00281g00079 Petunia axillaris HOM05D007577 ORTHO05D002366 8.2e-17 90.9 191 38.2
Duzib093G2023 Durio zibethinus HOM05D007577 ORTHO05D002366 1.8e-16 89.7 148 39.9
Potri.005G158400 Populus trichocarpa HOM05D007577 ORTHO05D002366 1.8e-16 89.7 184 38.6
COL.COLO4_35193 Corchorus olitorius HOM05D007577 ORTHO05D002366 1.5e-15 86.7 162 37.7
Nitab4.5_0001507g0070 Nicotiana tabacum HOM05D007577 ORTHO05D002366 2.0e-15 86.3 188 36.7
Gohir.A05G221500 Gossypium hirsutum HOM05D007577 ORTHO05D002366 2.6e-15 85.9 137 44.5
MD15G1381100 Malus domestica HOM05D007577 ORTHO05D002366 2.6e-15 85.9 168 43.5
TAR376G0287 Trochodendron aralioides HOM05D007577 ORTHO05D002366 2.6e-15 85.9 140 40.0
Prupe.1G527300 Prunus persica HOM05D007577 ORTHO05D002366 3.4e-15 85.5 173 39.3
Solyc04g076010.3 Solanum lycopersicum HOM05D007577 ORTHO05D002366 4.5e-15 85.1 159 41.5
FvH4_5g35850 Fragaria vesca HOM05D007577 ORTHO05D002366 7.7e-15 84.3 215 35.8
Phvul.008G179400 Phaseolus vulgaris HOM05D007577 ORTHO05D002366 7.7e-15 84.3 162 38.9
vmacro21310 Vaccinium macrocarpon HOM05D007577 ORTHO05D002366 7.7e-15 84.3 149 42.3
Medtr5g065350 Medicago truncatula HOM05D007577 ORTHO05D002366 1.0e-14 84.0 149 40.9
FAN18G2443 Fragaria x ananassa HOM05D007577 ORTHO05D002366 1.7e-14 83.2 215 35.3
FAN08G0887 Fragaria x ananassa HOM05D007577 ORTHO05D002366 2.2e-14 82.8 215 35.3
Gohir.D05G224200 Gossypium hirsutum HOM05D007577 ORTHO05D002366 2.2e-14 82.8 137 43.1
Gorai.009G231700 Gossypium raimondii HOM05D007577 ORTHO05D002366 6.5e-14 81.3 137 43.1
Actinidia10365 Actinidia chinensis HOM05D007577 ORTHO05D002366 1.1e-13 80.5 150 40.0
FAN04G3208 Fragaria x ananassa HOM05D007577 ORTHO05D002366 1.1e-13 80.5 214 35.5
Nitab4.5_0006922g0010 Nicotiana tabacum HOM05D007577 ORTHO05D002366 1.1e-13 80.5 151 40.4
Atru.chr13.1051 Acer truncatum HOM05D007577 ORTHO05D002366 3.2e-13 79.0 154 35.7
Glyma.02G212100 Glycine max HOM05D007577 ORTHO05D002366 4.2e-13 78.6 163 36.8
arahy.Tifrunner.gnm1.ann1.15IZES Arachis hypogaea HOM05D007577 ORTHO05D002366 5.5e-13 78.2 145 40.0
Glyma.14G179800 Glycine max HOM05D007577 ORTHO05D002366 5.5e-13 78.2 161 37.3
Eucgr.F00405 Eucalyptus grandis HOM05D007577 ORTHO05D002366 9.4e-13 77.4 156 40.4
MD08G1192700 Malus domestica HOM05D007577 ORTHO05D002366 1.2e-12 77.0 172 38.4
Duzib116G0880 Durio zibethinus HOM05D007577 ORTHO05D002366 1.6e-12 76.6 128 36.7
LjContig00408g0001347 Lotus japonicus HOM05D007577 ORTHO05D002366 1.6e-12 76.6 198 34.3
Lalb_Chr04g0253001 Lupinus albus HOM05D007577 ORTHO05D002366 1.6e-12 76.6 180 33.3
RcHm_v2.0_Chr7g0237581 Rosa chinensis HOM05D007577 ORTHO05D002366 1.6e-12 76.6 169 37.3
Gohir.A02G077300 Gossypium hirsutum HOM05D007577 ORTHO05D002366 2.1e-12 76.3 145 40.0
PGR042G1402 Punica granatum HOM05D007577 ORTHO05D002366 2.7e-12 75.9 196 32.1
Rhsim06G0074200 Rhododendron simsii HOM05D004661 ORTHO05D005827 2.7e-12 75.9 149 40.3
Oeu043942.1 Olea europaea HOM05D007577 ORTHO05D002366 3.6e-12 75.5 134 42.5
VMungo0647G2546 Vigna mungo HOM05D007577 ORTHO05D002366 3.6e-12 75.5 203 33.5
Lalb_Chr17g0344401 Lupinus albus HOM05D007577 ORTHO05D002366 1.0e-11 73.9 154 35.7
CANSAT25G2895 Cannabis sativa HOM05D007577 ORTHO05D002366 1.8e-11 73.2 166 40.4
Cc10_g15550 Coffea canephora HOM05D007577 ORTHO05D002366 2.3e-11 72.8 155 38.1
TWI12G1315 Tripterygium wilfordii HOM05D007577 ORTHO05D002366 2.3e-11 72.8 148 36.5
Lalb_Chr10g0102661 Lupinus albus HOM05D007577 ORTHO05D002366 3.0e-11 72.4 191 33.0
CSS0010517 Camellia sinensis var. sinensis HOM05D007577 ORTHO05D002366 3.9e-11 72.0 136 45.6
Gorai.005G095300 Gossypium raimondii HOM05D007577 ORTHO05D002366 3.3e-10 68.9 146 38.4
SalBow3G1297 Salvia bowleyana HOM05D007577 ORTHO05D002366 3.3e-10 68.9 166 34.9
Gohir.D02G084600 Gossypium hirsutum HOM05D007577 ORTHO05D002366 5.7e-10 68.2 146 39.7
EL10Ac1g01102 Beta vulgaris HOM05D007577 ORTHO05D002366 7.4e-10 67.8 168 33.9
Migut.N00361 Erythranthe guttata HOM05D007577 ORTHO05D002366 7.4e-10 67.8 134 40.3
Psat0s2495g0040 Pisum sativum HOM05D007577 ORTHO05D002366 7.4e-10 67.8 196 32.7
Cpa.g.sc608.1 Carica papaya HOM05D007577 ORTHO05D002366 1.3e-09 67.0 181 33.7
TPR.G20891 Trifolium pratense HOM05D007577 ORTHO05D002366 1.3e-09 67.0 163 35.0
TAR625G1503 Trochodendron aralioides HOM05D007577 ORTHO05D002366 1.3e-09 67.0 138 37.0
PGR031G3996 Punica granatum HOM05D007577 ORTHO05D002366 2.8e-09 65.9 135 37.8
arahy.Tifrunner.gnm1.ann1.MEQI9D Arachis hypogaea HOM05D007577 ORTHO05D002366 3.7e-09 65.5 148 35.8
MSTRG.24626 Avicennia marina HOM05D007577 ORTHO05D002366 4.8e-09 65.1 140 38.6
Hund27003 Selenicereus undatus HOM05D007577 ORTHO05D002366 6.3e-09 64.7 167 32.9
Sc23g0000570 Simmondsia chinensis HOM05D007577 ORTHO05D002366 1.1e-08 63.9 139 36.7
Ciclev10002010m.g Citrus clementina HOM05D007577 ORTHO05D002366 2.4e-08 62.8 176 33.5
Dinv44835 Davidia involucrata HOM05D007577 ORTHO05D002366 3.1e-08 62.4 85 42.4
Lsat_1_v5_gn_1_2280 Lactuca sativa HOM05D007577 ORTHO05D002366 3.1e-08 62.4 167 33.5
TAR628G0666 Trochodendron aralioides HOM05D007577 ORTHO05D002366 1.5e-07 60.1 124 36.3
ATR0022G018 Amborella trichopoda HOM05D007577 ORTHO05D002366 4.5e-07 58.5 138 32.6
TWI56G0426 Tripterygium wilfordii HOM05D007577 ORTHO05D002366 7.7e-07 57.8 164 31.1
Actinidia30808 Actinidia chinensis HOM05D007577 ORTHO05D002366 1.3e-06 57.0 41 68.3
Sc26g0000220 Simmondsia chinensis HOM05D007577 ORTHO05D002366 1.3e-06 57.0 137 33.6
Nn1g05500 Nelumbo nucifera HOM05D007577 ORTHO05D002366 8.5e-06 54.3 124 29.0


User provided reference genes

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