Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 3.6e-155 551.6 290 100.0
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 1.4e-146 523.1 293 94.5
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 1.8e-146 522.7 292 94.9
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 1.1e-132 476.9 254 92.1
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 7.1e-111 404.4 285 70.9
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 1.0e-109 400.6 235 80.4
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.3e-109 400.2 242 78.9
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 2.3e-109 399.4 284 69.7
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 5.1e-109 398.3 290 69.0
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 5.1e-109 398.3 241 78.8
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 8.7e-109 397.5 258 75.2
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 8.7e-109 397.5 263 73.8
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.1e-108 397.1 248 77.4
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.9e-108 396.4 223 82.1
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.5e-108 396.0 224 82.6
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 4.3e-108 395.2 287 70.7
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 7.4e-108 394.4 258 74.8
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 1.3e-107 393.7 227 80.6
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 3.7e-107 392.1 237 78.9
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 4.8e-107 391.7 237 78.1
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 6.3e-107 391.3 224 81.7
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 8.2e-107 391.0 286 69.6
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 8.2e-107 391.0 285 67.7
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 8.2e-107 391.0 229 78.6
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 1.1e-106 390.6 257 74.3
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.1e-106 390.6 285 67.4
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.1e-106 390.6 283 68.9
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 1.8e-106 389.8 239 78.7
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 4.1e-106 388.7 229 79.0
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 9.0e-106 387.5 253 75.5
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 1.2e-105 387.1 290 66.6
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 3.4e-105 385.6 283 66.8
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 3.4e-105 385.6 262 71.0
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 3.4e-105 385.6 286 67.1
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 3.4e-105 385.6 257 73.2
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 4.5e-105 385.2 285 67.4
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 5.9e-105 384.8 242 75.6
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 1.3e-104 383.6 235 77.4
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.7e-104 383.3 288 67.0
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.2e-104 382.9 290 66.2
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.9e-104 382.5 223 80.3
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.9e-104 382.5 263 71.5
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 2.9e-104 382.5 273 68.5
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 6.5e-104 381.3 242 74.8
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 1.9e-103 379.8 242 74.4
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 1.9e-103 379.8 226 78.8
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 1.2e-102 377.1 234 74.8
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 1.2e-102 377.1 244 74.6
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.6e-102 376.7 253 72.3
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 2.1e-102 376.3 223 78.9
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 4.6e-102 375.2 281 66.5
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 6.1e-102 374.8 285 65.3
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 6.1e-102 374.8 237 75.9
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 7.9e-102 374.4 234 76.5
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 7.9e-102 374.4 231 75.8
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 7.9e-102 374.4 228 75.9
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.0e-101 374.0 241 73.4
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 1.3e-101 373.6 238 75.2
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 3.0e-101 372.5 235 73.2
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 5.1e-101 371.7 239 73.2
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 8.7e-101 370.9 235 72.8
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.1e-100 370.5 237 75.1
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.1e-100 370.5 227 77.5
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.9e-100 369.8 235 75.3
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 5.7e-100 368.2 231 74.5
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.6e-99 366.7 253 72.3
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 2.2e-99 366.3 270 66.7
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 2.2e-99 366.3 222 76.1
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.8e-99 365.9 262 68.7
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 3.7e-99 365.5 253 69.2
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 4.8e-99 365.2 276 64.5
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 8.2e-99 364.4 276 64.9
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 6.9e-98 361.3 230 73.5
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 6.9e-98 361.3 276 64.5
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 9.0e-98 360.9 241 71.0
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 3.4e-97 359.0 290 63.4
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.7e-96 356.7 251 67.7
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 2.2e-96 356.3 251 68.1
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 3.8e-96 355.5 278 62.6
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 3.8e-96 355.5 244 70.9
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 6.5e-96 354.8 238 70.6
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 1.4e-95 353.6 244 70.9
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 2.5e-95 352.8 254 70.9
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 3.2e-95 352.4 239 69.5
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.2e-95 352.1 225 72.9
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.2e-94 350.5 228 72.8
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.6e-94 350.1 225 72.0
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 1.8e-93 346.7 224 73.7
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.5e-92 343.6 301 58.1
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 3.3e-92 342.4 262 66.4
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 1.3e-91 340.5 262 66.8
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.4e-90 337.0 211 76.8
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 9.1e-90 334.3 253 67.6
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 5.9e-89 331.6 222 73.9
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 6.5e-88 328.2 258 64.7
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 3.9e-85 318.9 221 67.4
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 5.2e-85 318.5 207 73.9
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 8.2e-83 311.2 243 64.2
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 3.1e-82 309.3 237 61.2
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 4.1e-82 308.9 237 65.0
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 4.5e-81 305.4 264 61.0
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.0e-80 304.3 225 63.6
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 2.2e-80 303.1 234 64.5
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 5.0e-80 302.0 175 80.6
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 1.5e-79 300.4 238 63.9
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 1.6e-78 297.0 237 62.9
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 3.0e-77 292.7 233 61.4
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 3.0e-77 292.7 236 61.9
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.0e-76 290.0 166 80.7
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 4.8e-75 285.4 174 77.0
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 1.2e-73 280.8 187 75.4
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 2.7e-73 279.6 253 54.2
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 1.1e-71 274.2 226 60.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.5e-71 273.1 165 78.8
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 8.8e-69 264.6 171 73.1
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 6.3e-67 258.5 208 59.1
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 6.5e-64 248.4 167 71.3
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 1.9e-55 220.3 136 70.6
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 4.0e-53 212.6 133 73.7
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 8.9e-53 211.5 151 64.9
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.6e-49 199.1 199 56.3
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 5.0e-48 195.7 145 63.4
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 2.5e-47 193.4 210 46.2
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.5e-47 193.4 149 61.1
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 3.1e-45 186.4 207 47.3
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 2.9e-43 179.9 183 56.8
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 1.2e-41 174.5 136 66.9
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 1.7e-40 170.6 132 61.4
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.5e-33 146.4 90 74.4
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 2.8e-30 136.7 131 58.0
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 6.2e-22 109.0 90 56.7
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 5.2e-21 105.9 131 48.1
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.5e-20 104.4 127 47.2
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.1e-18 98.2 80 61.2
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 4.0e-13 79.7 125 36.0
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 7.6e-12 75.5 77 51.9
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 1.9e-10 70.9 41 68.3
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 5.1e-08 62.8 48 62.5
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 1.9e-07 60.8 84 38.1


User provided reference genes

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