Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 2.7e-79 298.5 144 100.0
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 5.7e-69 264.2 145 89.0
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 3.7e-68 261.5 144 84.7
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 9.1e-67 256.9 144 86.8
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 8.6e-65 250.4 144 84.7
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 1.1e-35 153.7 147 57.1
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 9.2e-35 150.6 146 55.5
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 4.6e-34 148.3 146 55.5
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 6.0e-34 147.9 144 54.9
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 1.7e-33 146.4 146 54.8
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.7e-33 146.4 144 54.9
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 3.0e-33 145.6 145 54.5
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 1.6e-31 139.8 146 52.1
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 2.1e-31 139.4 148 54.7
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 2.1e-31 139.4 144 51.4
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 2.8e-31 139.0 144 51.4
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 3.6e-31 138.7 144 53.5
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 4.7e-31 138.3 144 54.2
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 4.7e-31 138.3 144 50.7
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 4.7e-31 138.3 144 50.7
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 6.2e-31 137.9 144 50.7
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 6.2e-31 137.9 146 51.4
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.4e-30 136.0 148 52.7
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 4.0e-30 135.2 148 53.4
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 6.8e-30 134.4 145 50.3
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 6.8e-30 134.4 144 50.0
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 6.8e-30 134.4 147 53.7
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 8.9e-30 134.0 144 52.1
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 2.0e-29 132.9 146 54.1
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 2.0e-29 132.9 145 50.3
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 3.4e-29 132.1 145 49.7
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 7.6e-29 131.0 144 48.6
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 2.2e-28 129.4 144 47.2
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 3.8e-28 128.6 144 47.2
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 8.4e-28 127.5 144 49.3
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 1.9e-27 126.3 147 53.1
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 2.4e-27 125.9 135 50.4
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 3.5e-26 122.1 146 48.6
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 4.6e-26 121.7 151 43.7
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 1.9e-24 116.3 144 43.1
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.9e-24 116.3 144 48.6
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 1.9e-24 116.3 146 43.2
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 2.5e-24 115.9 148 45.9
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 2.1e-23 112.8 144 43.8
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 2.8e-23 112.5 144 43.8
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 6.2e-23 111.3 145 45.5
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 8.1e-23 110.9 131 43.5
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 8.1e-23 110.9 131 48.1
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 1.4e-22 110.2 135 45.9
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 1.4e-22 110.2 147 44.2
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 1.4e-22 110.2 141 46.8
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 3.1e-22 109.0 145 43.4
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 3.1e-22 109.0 147 43.5
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 2.6e-21 105.9 135 45.2
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 2.6e-21 105.9 130 46.9
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 2.6e-21 105.9 135 45.2
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 3.4e-21 105.5 116 48.3
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 4.4e-21 105.1 130 46.2
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 2.2e-20 102.8 148 43.9
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 4.9e-20 101.7 145 43.4
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 1.1e-19 100.5 111 45.0
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 1.4e-19 100.1 136 42.6
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.4e-19 100.1 145 42.1
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.4e-19 100.1 145 42.1
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 1.9e-19 99.8 136 42.6
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 2.4e-19 99.4 145 42.8
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 2.4e-19 99.4 111 45.0
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 4.2e-19 98.6 117 47.0
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 5.4e-19 98.2 124 46.8
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 1.6e-18 96.7 108 44.4
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 6.0e-18 94.7 111 44.1
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 1.3e-17 93.6 146 43.2
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 6.4e-12 74.7 141 38.3
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 3.5e-10 68.9 134 32.8
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 3.0e-09 65.9 39 69.2
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 3.9e-09 65.5 40 67.5
SGA_v2.0_scaffold16G07882 Striga asiatica HOM05D002803 ORTHO05D003089 4.3e-08 62.0 146 28.1
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 4.3e-08 62.0 129 29.5
SGA_v2.0_scaffold59G20630 Striga asiatica HOM05D002803 ORTHO05D003089 5.6e-08 61.6 133 28.6
Nitab4.5_0007199g0010 Nicotiana tabacum HOM05D002803 ORTHO05D003089 1.3e-07 60.5 113 33.6
Nitab4.5_0000221g0090 Nicotiana tabacum HOM05D002803 ORTHO05D003089 2.1e-07 59.7 145 30.3
PGSC0003DMG400007474 Solanum tuberosum HOM05D002803 ORTHO05D003089 2.8e-07 59.3 122 29.5
HanXRQChr16g0528841 Helianthus annuus HOM05D002803 ORTHO05D003089 6.2e-07 58.2 147 29.3
Peaxi162Scf00367g00712 Petunia axillaris HOM05D002803 ORTHO05D003089 8.1e-07 57.8 54 48.1
Actinidia38399 Actinidia chinensis HOM05D002803 ORTHO05D003089 1.1e-06 57.4 108 31.5
MSTRG.813 Avicennia marina HOM05D002803 ORTHO05D003089 1.8e-06 56.6 142 26.1
SMO367G0928 Selaginella moellendorffii HOM05D002803 ORTHO05D003089 3.1e-06 55.8 62 45.2
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 3.1e-06 55.8 115 31.3
Migut.E00292 Erythranthe guttata HOM05D002803 ORTHO05D003089 4.0e-06 55.5 116 31.9
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 4.0e-06 55.5 55 45.5
Oeu044623.1 Olea europaea HOM05D002803 ORTHO05D003089 4.0e-06 55.5 137 28.5
Dinv05804 Davidia involucrata HOM05D002803 ORTHO05D003089 5.3e-06 55.1 134 32.8
unitig_52.g17150 Utricularia gibba HOM05D002803 ORTHO05D003089 6.9e-06 54.7 121 30.6
BcaB04g17373 Brassica carinata HOM05D002803 ORTHO05D003089 9.0e-06 54.3 106 32.1
Lalb_Chr07g0178561 Lupinus albus HOM05D002803 ORTHO05D003089 9.0e-06 54.3 92 35.9
Sc04g0006760 Simmondsia chinensis HOM05D002803 ORTHO05D003089 9.0e-06 54.3 70 40.0


User provided reference genes

Program Settings