Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 1.0e-102 376.7 188 100.0
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 3.0e-94 348.6 188 91.0
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 5.1e-94 347.8 186 90.3
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.0e-93 345.9 188 89.9
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 2.5e-80 302.4 188 76.1
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 4.2e-80 301.6 188 79.3
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 9.4e-80 300.4 182 79.1
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.2e-79 300.1 186 77.4
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.2e-79 300.1 194 76.3
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.6e-79 299.7 187 78.6
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 1.6e-79 299.7 188 75.5
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 2.1e-79 299.3 194 76.3
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 2.7e-79 298.9 188 78.7
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.4e-78 296.6 195 75.4
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.8e-78 296.2 186 73.1
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 8.8e-78 293.9 188 74.5
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.2e-77 293.5 188 76.1
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 1.2e-77 293.5 186 76.3
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.2e-77 293.5 188 75.0
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 2.6e-77 292.4 186 74.2
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 3.3e-77 292.0 189 75.1
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.3e-77 292.0 188 75.5
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 3.3e-77 292.0 188 72.9
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 4.4e-77 291.6 190 75.3
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 7.5e-77 290.8 186 74.7
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 9.7e-77 290.4 186 74.7
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.7e-76 289.7 187 77.0
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.8e-76 288.9 192 71.9
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 8.2e-76 287.3 184 75.0
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 1.1e-75 287.0 188 73.4
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.4e-75 286.6 186 72.6
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.4e-75 286.6 186 72.6
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.4e-75 286.6 186 75.3
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.8e-75 286.2 186 72.6
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.8e-75 286.2 181 73.5
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 3.1e-75 285.4 188 73.9
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 3.1e-75 285.4 190 73.7
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 5.3e-75 284.6 188 71.8
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 9.1e-75 283.9 188 73.9
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 9.1e-75 283.9 186 74.7
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 2.0e-74 282.7 191 72.8
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 2.0e-74 282.7 192 70.3
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.3e-73 280.0 186 72.6
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 2.2e-73 279.3 191 73.8
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 2.2e-73 279.3 198 68.2
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.9e-73 278.9 188 68.6
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.9e-73 278.9 183 71.6
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 3.8e-73 278.5 191 73.8
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 3.8e-73 278.5 188 70.7
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 3.8e-73 278.5 188 70.7
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 5.0e-73 278.1 198 68.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 8.5e-73 277.3 184 73.9
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.9e-72 276.2 188 70.2
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.9e-72 276.2 188 70.2
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 2.5e-72 275.8 194 69.1
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.2e-72 275.0 188 69.7
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 5.5e-72 274.6 192 71.9
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 7.2e-72 274.2 201 67.2
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 7.2e-72 274.2 183 71.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 9.4e-72 273.9 181 71.8
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 9.4e-72 273.9 200 67.5
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 2.1e-71 272.7 178 74.2
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.4e-70 270.0 188 69.1
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.3e-70 269.2 188 69.1
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.0e-70 268.9 188 70.2
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.0e-70 268.5 188 69.1
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 5.2e-70 268.1 185 70.8
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 5.2e-70 268.1 186 68.3
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 6.8e-70 267.7 199 66.3
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 6.8e-70 267.7 193 67.4
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.2e-69 266.9 186 67.2
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.0e-69 266.2 181 71.3
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 4.4e-69 265.0 187 67.9
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 7.5e-69 264.2 188 68.1
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.3e-68 263.5 188 67.6
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.3e-68 263.5 186 67.7
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.8e-68 262.3 188 67.0
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 3.7e-68 261.9 186 65.1
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.8e-67 259.6 186 68.8
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 4.1e-67 258.5 190 65.8
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.1e-67 258.5 192 69.3
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.1e-67 258.5 192 69.3
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.2e-66 256.9 199 64.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.6e-66 256.5 202 67.8
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.7e-66 255.8 173 67.1
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.0e-65 251.5 216 63.4
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.5e-64 250.0 186 61.8
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 2.1e-63 246.1 260 51.9
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 8.8e-62 240.7 156 73.7
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.1e-59 233.8 153 73.2
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.8e-59 233.0 155 72.3
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.0e-58 229.6 150 74.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.8e-57 225.3 155 71.0
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 9.5e-56 220.7 159 67.3
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 2.8e-55 219.2 182 58.8
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.4e-54 216.9 188 60.1
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 6.8e-54 214.5 186 57.5
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 4.4e-53 211.8 153 68.0
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 4.4e-53 211.8 155 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 7.5e-53 211.1 178 56.2
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 9.8e-53 210.7 170 62.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 2.9e-52 209.1 188 58.5
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 6.4e-52 208.0 149 67.1
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.4e-51 206.1 157 68.2
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 5.2e-46 188.3 138 63.8
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 3.9e-41 172.2 190 51.1
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.4e-38 163.7 186 46.8
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 8.3e-36 154.5 188 43.1
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 9.2e-35 151.0 132 59.8
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 2.4e-30 136.3 182 44.0
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 5.2e-30 135.2 182 41.2
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.6e-29 132.9 78 78.2
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.2e-26 124.0 182 43.4
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 9.3e-19 97.8 56 75.0


User provided reference genes

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