Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 3.1e-303 1044.3 512 100.0
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.5e-167 590.9 474 67.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 8.9e-165 584.3 474 66.7
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.1e-162 577.4 474 65.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.7e-129 466.5 458 53.9
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 7.9e-129 464.9 472 52.5
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.1e-126 456.8 456 53.3
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.8e-126 456.4 465 53.5
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 8.1e-126 454.9 462 52.8
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.4e-125 454.1 456 52.2
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.4e-125 453.4 456 52.4
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.2e-124 451.1 456 54.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 2.6e-124 449.9 464 50.9
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.8e-123 446.0 472 50.8
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 8.4e-123 444.9 461 52.7
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.9e-122 443.7 471 49.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 5.5e-122 442.2 462 49.8
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 6.0e-121 438.7 472 51.5
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 7.9e-121 438.3 456 49.8
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.3e-120 436.8 470 50.2
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 2.3e-120 436.8 455 51.0
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.1e-120 435.6 435 54.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.1e-120 435.6 460 52.0
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 5.1e-120 435.6 462 51.7
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.9e-119 433.7 456 50.9
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 3.7e-118 429.5 534 45.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 3.7e-118 429.5 561 45.3
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 4.8e-118 429.1 455 50.5
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.2e-118 428.7 520 45.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 8.1e-118 428.3 458 51.3
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.1e-117 427.9 456 50.9
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.8e-117 427.2 455 50.5
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 4.0e-117 426.0 454 50.2
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 4.0e-117 426.0 455 50.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.3e-117 425.6 456 50.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.2e-116 424.5 455 50.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.0e-116 423.7 455 50.5
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.6e-116 423.3 462 50.0
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 3.4e-116 422.9 463 50.1
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 7.6e-116 421.8 455 47.7
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.0e-115 421.4 457 50.5
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.7e-115 420.6 457 50.1
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 4.6e-113 412.5 456 49.1
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 4.6e-113 412.5 461 49.7
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.3e-112 410.2 456 49.6
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.1e-111 407.9 464 47.2
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.9e-111 407.1 458 48.7
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.8e-110 403.3 459 49.0
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 2.8e-110 403.3 456 48.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.8e-109 400.6 456 47.4
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 3.1e-109 399.8 457 47.5
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.2e-108 397.9 463 47.5
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 6.5e-107 392.1 457 46.4
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.8e-104 384.0 435 48.0
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.3e-104 383.6 568 41.5
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 9.1e-101 371.7 460 44.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.9e-99 366.7 458 44.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.9e-98 364.0 455 45.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 3.2e-98 363.2 460 45.0
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 3.2e-98 363.2 468 45.1
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.2e-98 363.2 468 45.1
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-97 361.3 457 45.3
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.2e-94 350.5 460 45.2
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 8.5e-83 312.0 350 48.9
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.3e-80 303.9 205 67.8
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 2.0e-76 290.8 238 61.3
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.0e-75 288.5 271 53.9
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 8.8e-72 275.4 354 44.1
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 2.1e-65 254.2 460 33.9
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.2e-62 244.2 463 34.6
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 5.0e-59 233.0 301 41.2
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.6e-59 232.6 408 38.0
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.9e-58 231.1 209 55.0
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.4e-56 224.9 271 47.6
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 2.4e-53 214.2 274 41.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 4.1e-53 213.4 199 53.3
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 6.2e-49 199.5 142 63.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 8.1e-41 172.6 105 73.3
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.1e-35 153.3 462 28.4
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 3.2e-29 134.0 213 40.4
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.2e-23 115.5 318 29.9
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.4e-23 113.6 113 49.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.6e-23 112.8 91 62.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-22 112.1 71 74.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.2e-22 111.3 91 62.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.4e-22 109.8 91 62.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 5.4e-21 106.7 184 39.7
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 9.3e-21 105.9 347 25.9
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.5e-20 104.0 100 46.0
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.3e-19 102.1 110 47.3
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.7e-19 101.7 111 47.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 8.7e-19 99.4 116 43.1
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 8.7e-19 99.4 116 43.1
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.0e-16 90.5 89 55.1
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.2e-15 89.0 208 30.8
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.8e-15 86.7 50 76.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 5.8e-15 86.7 60 61.7
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.9e-14 83.6 81 53.1
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.9e-13 81.6 123 39.8
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.1e-12 78.2 55 61.8
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.0e-11 74.3 129 37.2
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.6e-09 68.6 85 48.2
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.1e-08 65.9 61 54.1
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.4e-08 65.5 107 40.2
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.8e-08 65.1 49 53.1


User provided reference genes

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