Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G004740 Citrullus lanatus HOM05D003486 ORTHO05D004600 6.6e-105 384.0 193 100.0
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 1.0e-65 253.8 175 76.6
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 2.6e-64 249.2 146 86.3
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 1.1e-62 243.8 175 76.0
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 2.0e-37 159.8 171 52.6
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 8.9e-33 144.4 142 54.2
GSVIVG01010757001 Vitis vinifera HOM05D003486 ORTHO05D004600 8.9e-33 144.4 135 56.3
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 1.2e-32 144.1 138 53.6
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 1.2e-32 144.1 138 53.6
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 1.2e-32 144.1 138 53.6
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 1.2e-32 144.1 129 56.6
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 2.6e-32 142.9 161 48.4
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 7.5e-32 141.4 140 55.7
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 2.2e-31 139.8 142 51.4
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 2.2e-31 139.8 157 49.0
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 2.8e-31 139.4 165 48.5
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 6.3e-31 138.3 142 52.1
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 8.3e-31 137.9 124 56.5
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 1.1e-30 137.5 143 53.1
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 1.1e-30 137.5 143 54.5
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.4e-30 137.1 126 56.3
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 1.8e-30 136.7 144 51.4
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 3.2e-30 136.0 134 54.5
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 4.1e-30 135.6 125 56.8
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 4.1e-30 135.6 125 56.8
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 7.0e-30 134.8 133 55.6
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 9.2e-30 134.4 143 49.0
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 9.2e-30 134.4 115 58.3
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.2e-29 134.0 141 49.6
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 1.2e-29 134.0 129 55.0
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 1.6e-29 133.7 142 51.4
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.6e-29 133.7 152 52.0
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 2.7e-29 132.9 141 48.9
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 4.6e-29 132.1 126 55.6
Nn1g09587 Nelumbo nucifera HOM05D003486 ORTHO05D004600 4.6e-29 132.1 135 56.3
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 4.6e-29 132.1 127 55.1
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 4.6e-29 132.1 142 51.4
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 1.0e-28 131.0 128 52.3
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 1.7e-28 130.2 117 55.6
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 1.7e-28 130.2 117 56.4
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 2.3e-28 129.8 172 47.1
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 2.9e-28 129.4 182 47.3
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 2.9e-28 129.4 125 55.2
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 5.0e-28 128.6 137 51.8
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 1.1e-27 127.5 171 43.3
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.5e-27 127.1 156 45.5
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 1.5e-27 127.1 156 45.5
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 1.5e-27 127.1 129 52.7
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 1.5e-27 127.1 138 51.4
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 1.5e-27 127.1 142 49.3
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 2.5e-27 126.3 171 48.5
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 3.3e-27 125.9 105 60.0
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 7.3e-27 124.8 117 53.0
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 9.5e-27 124.4 133 53.4
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 1.2e-26 124.0 125 51.2
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 3.6e-26 122.5 132 55.3
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 3.6e-26 122.5 132 55.3
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 4.7e-26 122.1 110 55.5
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 8.0e-26 121.3 140 48.6
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 1.0e-25 120.9 133 48.1
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 1.0e-25 120.9 143 44.8
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 3.1e-25 119.4 140 46.4
Nitab4.5_0001940g0020 Nicotiana tabacum HOM05D003486 ORTHO05D004600 4.0e-25 119.0 126 52.4
Peaxi162Scf00126g00121 Petunia axillaris HOM05D003486 ORTHO05D004600 6.8e-25 118.2 133 51.1
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 6.8e-25 118.2 156 46.2
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 2.0e-24 116.7 135 47.4
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 2.6e-24 116.3 117 48.7
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 3.4e-24 115.9 117 52.1
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 3.4e-24 115.9 141 46.8
Solyc11g045000.1 Solanum lycopersicum HOM05D003486 ORTHO05D004600 4.4e-24 115.5 125 52.0
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 5.8e-24 115.2 156 46.8
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 7.5e-24 114.8 130 46.9
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 9.8e-24 114.4 193 39.4
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 9.8e-24 114.4 141 47.5
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 1.1e-22 110.9 157 44.6
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 2.4e-22 109.8 142 39.4
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 4.1e-22 109.0 118 50.0
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 7.8e-21 104.8 130 43.8
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 1.0e-20 104.4 130 43.1
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.3e-20 104.0 130 44.6
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 6.6e-20 101.7 98 57.1
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 1.4e-17 94.0 129 41.9
Cpa.g.sc9.277 Carica papaya HOM05D003486 ORTHO05D004600 2.3e-17 93.2 111 49.5
CAN.G336.7 Capsicum annuum HOM05D003486 ORTHO05D004600 1.4e-14 84.0 84 52.4
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 2.4e-14 83.2 154 38.3
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 3.2e-14 82.8 159 31.4
HPP92_023710 Vanilla planifolia HOM05D003486 ORTHO05D004600 3.2e-14 82.8 126 38.9
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 2.1e-13 80.1 126 40.5
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 3.5e-13 79.3 176 36.9
Ah.07g202030 Amaranthus hybridus HOM05D003486 ORTHO05D004600 8.6e-12 74.7 78 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 2.5e-11 73.2 136 36.8
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 2.1e-10 70.1 175 35.4
FAN07G1795 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.7e-07 60.5 100 37.0


User provided reference genes

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