Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G004400 Citrullus lanatus HOM05D000047 ORTHO05D001383 4.9e-173 611.3 372 100.0
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 4.3e-44 183.0 314 39.2
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 8.2e-43 178.7 164 56.7
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 6.9e-42 175.6 164 56.1
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 3.8e-40 169.9 184 51.6
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 5.0e-40 169.5 185 51.9
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-39 167.2 184 51.1
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 4.2e-39 166.4 184 51.6
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-39 166.0 352 36.4
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-39 165.6 184 51.1
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-39 165.6 184 51.1
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 7.2e-39 165.6 184 51.1
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-39 165.6 184 51.1
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 7.2e-39 165.6 184 51.1
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 7.2e-39 165.6 184 51.1
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-39 165.6 184 51.1
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 7.2e-39 165.6 184 51.1
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-39 165.2 184 50.5
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-38 164.5 170 52.9
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-38 164.5 170 52.9
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 2.1e-38 164.1 162 54.3
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-38 164.1 184 50.5
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-38 164.1 184 50.5
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-38 163.7 170 52.9
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 2.7e-38 163.7 184 50.5
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-38 163.3 184 50.5
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 4.6e-38 162.9 184 50.5
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 7.9e-38 162.2 147 57.8
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-38 162.2 184 50.0
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-37 161.4 184 50.0
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-37 161.4 184 50.0
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-37 161.4 184 50.5
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-37 161.0 184 49.5
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.3e-37 160.6 168 51.2
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-37 159.8 150 54.7
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-37 159.8 184 49.5
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 5.1e-37 159.5 147 57.8
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 5.1e-37 159.5 184 48.9
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-37 159.1 184 51.1
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 8.7e-37 158.7 156 54.5
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.1e-36 158.3 147 56.5
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-36 157.9 171 49.7
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 1.9e-36 157.5 162 52.5
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-36 157.5 170 51.2
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-36 157.1 171 50.9
Hund00874 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.3e-35 154.8 171 49.7
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-35 154.1 170 50.0
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-35 153.7 184 48.9
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 3.7e-35 153.3 184 48.4
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-34 151.8 162 51.2
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 1.8e-34 151.0 146 54.8
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 5.3e-34 149.4 185 47.0
ClCG02G008530 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.2e-33 148.3 237 43.9
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.6e-33 147.1 161 50.9
Dinv19964 Davidia involucrata HOM05D000047 ORTHO05D001383 5.9e-33 146.0 146 56.2
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 1.3e-32 144.8 162 47.5
Hund14969 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.7e-32 144.4 272 37.1
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-32 144.4 157 51.0
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-32 143.7 141 53.9
Sopen10g006090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-31 141.7 137 54.7
ClCG01G012050 Citrullus lanatus HOM05D000047 ORTHO05D000044 5.5e-31 139.4 114 62.3
ClCG09G014410 Citrullus lanatus HOM05D000047 ORTHO05D001383 5.5e-31 139.4 113 64.6
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.2e-30 138.3 152 50.0
Sopen08g016370 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-30 137.9 137 54.0
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-29 134.4 169 46.2
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-29 134.4 169 46.2
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.3e-29 134.0 147 51.7
Sopen02g008380 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-29 134.0 137 52.6
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 3.9e-29 133.3 274 34.7
ClCG04G001620 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.9e-29 133.3 130 52.3
Hund22313 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.9e-29 133.3 119 57.1
ClCG07G005810 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.1e-28 131.7 230 41.3
FvH4_3g07261 Fragaria vesca HOM05D000047 ORTHO05D001383 1.3e-27 128.3 120 53.3
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 1.3e-27 128.3 153 47.7
FvH4_7g04126 Fragaria vesca HOM05D000047 ORTHO05D001383 2.2e-27 127.5 155 47.1
Sopen04g015000 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-27 127.5 118 55.9
Hund17001 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.8e-27 127.1 127 54.3
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-26 124.4 167 45.5
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-25 121.3 167 44.3
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-24 118.6 152 46.7
ClCG07G003040 Citrullus lanatus HOM05D000047 ORTHO05D001383 6.5e-24 115.9 228 39.9
Hund04643 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.5e-24 115.9 133 46.6
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-24 115.9 153 45.1
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-23 115.2 142 47.9
Hund24526 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.9e-23 114.4 127 48.8
Sopen03g024220 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-23 114.4 200 36.5
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-23 114.0 108 57.4
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 3.2e-23 113.6 111 55.9
FvH4_2g31621 Fragaria vesca HOM05D000047 ORTHO05D001383 4.2e-23 113.2 110 51.8
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 5.5e-23 112.8 132 49.2
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-22 111.7 111 53.2
Hund00991 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.1e-22 109.4 116 50.0
Hund04095 Selenicereus undatus HOM05D000047 ORTHO05D001383 8.0e-22 109.0 116 50.0
PGSC0003DMG400036667 Solanum tuberosum HOM05D000047 ORTHO05D001383 2.3e-21 107.5 101 52.5
Sopen09g023170 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-21 107.1 130 48.5
Sopen11g022540 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-21 107.1 157 42.0
ClCG04G003080 Citrullus lanatus HOM05D000047 ORTHO05D001383 8.8e-21 105.5 97 57.7
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 2.0e-20 104.4 97 51.5
Sopen03g024900 Solanum pennellii HOM05D000047 ORTHO05D001383 2.0e-20 104.4 111 52.3
Hund08836 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.4e-20 103.2 124 48.4
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.4e-20 103.2 153 43.1
Gorai.006G115700 Gossypium raimondii HOM05D000047 ORTHO05D001383 1.3e-19 101.7 135 43.0
Sopen01g008120 Solanum pennellii HOM05D000047 ORTHO05D010949 3.7e-19 100.1 141 41.1
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 3.7e-19 100.1 97 50.5
Sopen09g024340 Solanum pennellii HOM05D000047 ORTHO05D001383 8.2e-19 99.0 111 47.7
Hund02341 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.8e-18 97.8 97 53.6
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-18 97.1 106 50.0
CAN.G1180.13 Capsicum annuum HOM05D000047 ORTHO05D001383 4.1e-18 96.7 80 60.0
Gohir.D09G098750 Gossypium hirsutum HOM05D000047 ORTHO05D001383 4.1e-18 96.7 133 42.1
Sopen02g013890 Solanum pennellii HOM05D000047 ORTHO05D001383 7.0e-18 95.9 111 51.4
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.2e-17 95.1 83 60.2
Sopen12g027080 Solanum pennellii HOM05D000047 ORTHO05D012839 1.6e-17 94.7 110 47.3
Hund17824 Selenicereus undatus HOM05D008791 ORTHO05D001383 4.5e-17 93.2 100 50.0
FvH4_5g32461 Fragaria vesca HOM05D000047 ORTHO05D001383 1.3e-16 91.7 116 40.5
ClCG09G014950 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.7e-16 91.3 103 53.4
Hund17818 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.7e-16 91.3 75 62.7
Hund14863 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.0e-16 89.7 135 42.2
Sopen02g004180 Solanum pennellii HOM05D000047 ORTHO05D001383 5.0e-16 89.7 102 47.1
Sopen05g014910 Solanum pennellii HOM05D000047 ORTHO05D010949 5.0e-16 89.7 63 68.3
Hund12310 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.2e-15 87.0 148 38.5
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 5.5e-15 86.3 100 47.0
PGSC0003DMG400042708 Solanum tuberosum HOM05D000047 ORTHO05D001383 2.7e-14 84.0 84 50.0
Sopen01g028390 Solanum pennellii HOM05D000047 ORTHO05D001383 8.0e-14 82.4 88 48.9
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 8.0e-14 82.4 102 46.1
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 2.3e-13 80.9 67 59.7
Sopen08g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-13 80.9 101 43.6
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-13 79.3 93 48.4
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 8.8e-13 79.0 112 42.9
Sopen10g015700 Solanum pennellii HOM05D000047 ORTHO05D001383 8.8e-13 79.0 83 51.8
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-12 78.2 81 53.1
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-12 77.4 85 50.6
Sopen01g005710 Solanum pennellii HOM05D000047 ORTHO05D010949 3.3e-12 77.0 84 52.4
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 4.4e-12 76.6 150 33.3
ClCG03G010450 Citrullus lanatus HOM05D000047 ORTHO05D001383 5.7e-12 76.3 240 30.4
Sopen02g001620 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-12 76.3 93 47.3
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 7.5e-12 75.9 67 56.7
PGSC0003DMG400042901 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.3e-11 75.1 73 52.1
Sopen05g014380 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-11 74.3 79 50.6
Hund05696 Selenicereus undatus HOM05D000070 ORTHO05D001383 3.7e-11 73.6 87 42.5
PGSC0003DMG400039552 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.8e-11 73.2 98 41.8
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 8.2e-11 72.4 88 45.5
PGSC0003DMG400040496 Solanum tuberosum HOM05D000047 ORTHO05D001383 8.2e-11 72.4 82 47.6
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-10 71.2 67 55.2
PGSC0003DMG400037395 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.1e-10 70.5 93 41.9
Sopen06g014950 Solanum pennellii HOM05D000047 ORTHO05D001383 7.0e-10 69.3 77 48.1
FvH4_5g28911 Fragaria vesca HOM05D000047 ORTHO05D001383 9.1e-10 68.9 68 48.5
PGSC0003DMG400037468 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.5e-09 67.0 82 43.9
PGSC0003DMG400046074 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.5e-09 67.0 93 40.9
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 4.5e-09 66.6 162 26.5
PGSC0003DMG400039242 Solanum tuberosum HOM05D000047 ORTHO05D001383 5.9e-09 66.2 57 56.1
PGSC0003DMG400040583 Solanum tuberosum HOM05D000047 ORTHO05D001383 7.7e-09 65.9 51 60.8
MELO3C021895.2 Cucumis melo HOM05D001244 ORTHO05D001076 2.2e-08 64.3 189 30.2
Hund11047 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.2e-08 64.3 60 55.0
Sopen09g025410 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-08 64.3 57 57.9
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 5.0e-08 63.2 48 60.4
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 5.0e-08 63.2 164 25.6
Sopen11g017180 Solanum pennellii HOM05D000047 ORTHO05D001383 6.5e-08 62.8 58 55.2
PGSC0003DMG400007580 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.5e-08 62.8 49 55.1
CANSAT54G2851 Cannabis sativa HOM05D008471 ORTHO05D002579 8.5e-08 62.4 151 27.2
PGSC0003DMG400035959 Solanum tuberosum HOM05D000047 ORTHO05D001383 8.5e-08 62.4 39 66.7
PGSC0003DMG400013969 Solanum tuberosum HOM05D008291 ORTHO05D012653 2.5e-07 60.8 69 46.4
Hund10081 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.2e-07 60.1 95 36.8
FAN26G0632 Fragaria x ananassa HOM05D002894 ORTHO05D002579 5.5e-07 59.7 94 34.0
PSO541G1592 Papaver somniferum HOM05D009560 ORTHO05D001383 2.1e-06 57.8 235 25.1
PSO675G4592 Papaver somniferum HOM05D009560 ORTHO05D001383 2.7e-06 57.4 106 28.3
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 2.7e-06 57.4 55 50.9
PGSC0003DMG400045406 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.6e-06 57.0 57 52.6
Sopen03g007040 Solanum pennellii HOM05D000047 ORTHO05D001383 4.7e-06 56.6 55 50.9
Oeu060302.1 Olea europaea HOM05D009708 ORTHO05D006662 6.1e-06 56.2 54 50.0
PGSC0003DMG400041787 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.1e-06 56.2 67 49.3
Sed0019829 Sechium edule HOM05D000047 ORTHO05D001383 8.0e-06 55.8 106 38.7


User provided reference genes

Program Settings