Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G004270 Citrullus lanatus HOM05D020518 ORTHO05D000378 2.7e-149 531.9 262 100.0
ClCG01G010510 Citrullus lanatus HOM05D020518 ORTHO05D149722 5.1e-15 85.9 65 66.2
ClCG03G010170 Citrullus lanatus HOM05D000691 ORTHO05D000378 1.4e-12 77.8 48 79.2
ClCG03G010260 Citrullus lanatus HOM05D000691 ORTHO05D000378 3.1e-12 76.6 48 77.1
FvH4_5g00040 Fragaria vesca HOM05D013248 ORTHO05D000378 9.0e-12 75.1 80 38.8
ClCG08G001720 Citrullus lanatus HOM05D020518 ORTHO05D149848 1.2e-11 74.7 44 70.5
ClCG01G010500 Citrullus lanatus HOM05D020518 ORTHO05D151426 7.6e-11 72.0 48 68.8
AUR62038564 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-09 68.2 81 42.0
Oeu030414.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-09 68.2 91 37.4
AUR62034419 Chenopodium quinoa HOM05D000004 ORTHO05D000378 3.2e-09 66.6 81 39.5
AUR62028639 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.2e-09 66.2 158 28.5
SGA_v2.0_scaffold50G18578 Striga asiatica HOM05D000691 ORTHO05D000378 4.2e-09 66.2 87 36.8
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 5.4e-09 65.9 117 32.5
CiPaw.05G045400 Carya illinoinensis HOM05D000691 ORTHO05D000378 7.1e-09 65.5 81 39.5
AUR62015945 Chenopodium quinoa HOM05D000252 ORTHO05D000378 7.1e-09 65.5 176 27.8
AUR62040250 Chenopodium quinoa HOM05D001333 ORTHO05D001208 7.1e-09 65.5 120 34.2
Oeu053090.1 Olea europaea HOM05D000691 ORTHO05D000378 7.1e-09 65.5 88 36.4
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 9.3e-09 65.1 91 35.2
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 9.3e-09 65.1 117 32.5
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 9.3e-09 65.1 117 32.5
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 9.3e-09 65.1 117 32.5
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 1.2e-08 64.7 81 39.5
Lj4C714G8 Lonicera japonica HOM05D000691 ORTHO05D000378 1.2e-08 64.7 81 39.5
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 1.6e-08 64.3 81 40.7
AUR62036964 Chenopodium quinoa HOM05D000030 ORTHO05D000378 1.6e-08 64.3 158 27.2
Sp6g09660 Schrenkiella parvula HOM05D000675 ORTHO05D000378 1.6e-08 64.3 81 43.2
AUR62032896 Chenopodium quinoa HOM05D001182 ORTHO05D000378 2.1e-08 63.9 74 41.9
AUR62039231 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.1e-08 63.9 74 41.9
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.1e-08 63.9 81 42.0
AL3G47720 Arabidopsis lyrata HOM05D000691 ORTHO05D000378 2.7e-08 63.5 93 37.6
AUR62001473 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 74 41.9
AUR62014239 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 74 41.9
AUR62032358 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 74 41.9
AUR62036824 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 74 41.9
AUR62037541 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 74 41.9
AUR62040870 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 74 41.9
AUR62041199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-08 63.5 100 37.0
AUR62042251 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.7e-08 63.5 169 27.8
AUR62044686 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.7e-08 63.5 169 27.8
AUR62044745 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.7e-08 63.5 169 27.8
AUR62044765 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.7e-08 63.5 169 27.8
AUR62009972 Chenopodium quinoa HOM05D000691 ORTHO05D000002 3.5e-08 63.2 74 41.9
AUR62042117 Chenopodium quinoa HOM05D008390 ORTHO05D000378 3.5e-08 63.2 88 36.4
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 4.6e-08 62.8 158 27.2
AUR62022482 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62024417 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62036802 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62037425 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62038369 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62039204 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62041639 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62041640 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
AUR62041848 Chenopodium quinoa HOM05D004398 ORTHO05D005268 4.6e-08 62.8 158 27.2
AUR62043027 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.6e-08 62.8 88 36.4
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-08 62.4 77 40.3
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-08 62.4 77 40.3
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-08 62.4 77 40.3
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-08 62.4 77 40.3
AUR62022985 Chenopodium quinoa HOM05D008390 ORTHO05D000378 6.0e-08 62.4 88 35.2
AUR62038991 Chenopodium quinoa HOM05D008390 ORTHO05D000378 6.0e-08 62.4 88 36.4
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 6.0e-08 62.4 102 35.3
CSS0000763 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-08 62.0 88 36.4
AUR62042209 Chenopodium quinoa HOM05D008390 ORTHO05D000378 7.8e-08 62.0 86 36.0
EL10Ac6g14162 Beta vulgaris HOM05D000691 ORTHO05D000378 1.0e-07 61.6 88 36.4
EL10Ac7g16302 Beta vulgaris HOM05D000691 ORTHO05D000378 1.0e-07 61.6 88 36.4
EL10Ac8g18762 Beta vulgaris HOM05D000691 ORTHO05D000378 1.0e-07 61.6 88 36.4
AUR62004840 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.0e-07 61.6 74 40.5
AUR62010243 Chenopodium quinoa HOM05D000187 ORTHO05D000378 1.0e-07 61.6 158 26.6
AUR62022775 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.0e-07 61.6 88 35.2
AUR62028467 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.0e-07 61.6 88 35.2
Lj4P131T15 Lonicera japonica HOM05D000691 ORTHO05D000378 1.0e-07 61.6 81 37.0
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-07 61.6 117 31.6
AUR62003905 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.3e-07 61.2 73 41.1
AUR62017655 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.3e-07 61.2 88 35.2
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.3e-07 61.2 74 40.5
FvH4_3g10531 Fragaria vesca HOM05D000691 ORTHO05D000378 1.3e-07 61.2 82 35.4
FvH4_6g12161 Fragaria vesca HOM05D000691 ORTHO05D000378 1.3e-07 61.2 74 39.2
PSO210G1278 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 134 32.8
AUR62005604 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.7e-07 60.8 74 40.5
AUR62039452 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.7e-07 60.8 158 26.6
AUR62044417 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.7e-07 60.8 88 35.2
AUR62032892 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.3e-07 60.5 73 39.7
FvH4_2g00261 Fragaria vesca HOM05D000691 ORTHO05D000378 2.3e-07 60.5 76 39.5
AUR62001812 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.0e-07 60.1 74 40.5
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 3.0e-07 60.1 76 38.2
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 3.0e-07 60.1 76 38.2
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.9e-07 59.7 88 36.4
AUR62029912 Chenopodium quinoa HOM05D008390 ORTHO05D000378 3.9e-07 59.7 121 31.4
Oeu029804.1 Olea europaea HOM05D000004 ORTHO05D000378 3.9e-07 59.7 82 37.8
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 5.1e-07 59.3 88 35.2
Hma1.2p1_0637F.1_g193600 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 5.1e-07 59.3 88 35.2
Lj2C116T7 Lonicera japonica HOM05D000691 ORTHO05D000378 5.1e-07 59.3 80 38.8
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 6.6e-07 58.9 94 35.1
AUR62042237 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.6e-07 58.9 81 34.6
FvH4_1g23713 Fragaria vesca HOM05D000691 ORTHO05D000378 6.6e-07 58.9 74 37.8
Gorai.001G162200 Gossypium raimondii HOM05D035971 ORTHO05D000378 6.6e-07 58.9 128 30.5
Oeu055027.1 Olea europaea HOM05D000691 ORTHO05D000378 6.6e-07 58.9 82 36.6
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 6.6e-07 58.9 73 38.4
AUR62012616 Chenopodium quinoa HOM05D002396 ORTHO05D002779 8.7e-07 58.5 73 39.7
AUR62029958 Chenopodium quinoa HOM05D008390 ORTHO05D000378 8.7e-07 58.5 88 34.1
Hma1.2p1_0177F.1_g077930 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 8.7e-07 58.5 88 35.2
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-07 58.5 81 34.6
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 1.1e-06 58.2 81 33.3
AUR62006162 Chenopodium quinoa HOM05D000394 ORTHO05D000299 1.1e-06 58.2 166 25.9
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-06 58.2 88 36.4
Oeu003392.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-06 58.2 114 32.5
Sopen05g005110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 58.2 84 34.5
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 1.5e-06 57.8 77 37.7
AUR62041334 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.5e-06 57.8 74 39.2
Oeu062538.1 Olea europaea HOM05D000691 ORTHO05D000378 1.5e-06 57.8 82 36.6
FvH4_1g29810 Fragaria vesca HOM05D000004 ORTHO05D000002 1.9e-06 57.4 74 36.5
Oeu029141.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-06 57.4 82 36.6
Oeu039051.1 Olea europaea HOM05D000004 ORTHO05D008835 1.9e-06 57.4 81 37.0
SHI15120 Sapria himalayana HOM05D000691 ORTHO05D000378 1.9e-06 57.4 102 32.4
SHI46291 Sapria himalayana HOM05D000004 ORTHO05D000378 2.5e-06 57.0 77 35.1
SHI46353 Sapria himalayana HOM05D000004 ORTHO05D000378 2.5e-06 57.0 77 35.1
EL10Ac3g05722 Beta vulgaris HOM05D000691 ORTHO05D000378 3.3e-06 56.6 88 36.4
AUR62034717 Chenopodium quinoa HOM05D008390 ORTHO05D000378 3.3e-06 56.6 87 33.3
FvH4_6g50161 Fragaria vesca HOM05D000691 ORTHO05D000378 3.3e-06 56.6 74 37.8
Oeu061141.1 Olea europaea HOM05D000004 ORTHO05D000378 3.3e-06 56.6 84 34.5
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-06 56.6 82 36.6
Sopen10g020250 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-06 56.6 81 34.6
AUR62040393 Chenopodium quinoa HOM05D007123 ORTHO05D000233 4.3e-06 56.2 81 35.8
Oeu018548.1 Olea europaea HOM05D000004 ORTHO05D000378 4.3e-06 56.2 82 36.6
Oeu032030.1 Olea europaea HOM05D000691 ORTHO05D000378 4.3e-06 56.2 82 35.4
Oeu037341.1 Olea europaea HOM05D000004 ORTHO05D000378 4.3e-06 56.2 82 35.4
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 5.6e-06 55.8 77 36.4
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 5.6e-06 55.8 84 38.1
AUR62010061 Chenopodium quinoa HOM05D001743 ORTHO05D000378 5.6e-06 55.8 74 36.5
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 5.6e-06 55.8 97 34.0
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-06 55.8 82 35.4
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-06 55.8 82 35.4
Sp4g07530 Schrenkiella parvula HOM05D000691 ORTHO05D000378 7.3e-06 55.5 73 41.1
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen06g007600 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 81 34.6
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 55.5 76 38.2
AUR62021227 Chenopodium quinoa HOM05D000196 ORTHO05D000378 9.6e-06 55.1 74 35.1
AUR62029957 Chenopodium quinoa HOM05D008390 ORTHO05D000378 9.6e-06 55.1 89 34.8
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 9.6e-06 55.1 145 26.2
FvH4_6g33011 Fragaria vesca HOM05D000691 ORTHO05D000378 9.6e-06 55.1 74 41.9
Oeu034465.1 Olea europaea HOM05D000691 ORTHO05D000378 9.6e-06 55.1 114 30.7
Oeu050727.1 Olea europaea HOM05D000691 ORTHO05D000378 9.6e-06 55.1 84 34.5
Oeu058971.1 Olea europaea HOM05D000004 ORTHO05D000378 9.6e-06 55.1 82 36.6
Oeu058974.1 Olea europaea HOM05D000004 ORTHO05D000378 9.6e-06 55.1 82 36.6
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-06 55.1 82 35.4
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-06 55.1 82 34.1


User provided reference genes

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