Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 0.0e+00 1093.6 547 100.0
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.6e-225 786.2 549 72.1
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.9e-222 775.4 549 71.6
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.4e-136 490.7 542 49.1
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.9e-136 490.3 550 48.4
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.0e-131 472.6 550 48.0
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 9.3e-128 461.5 556 47.1
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.2e-127 461.1 552 46.2
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 3.4e-122 443.0 521 47.6
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 6.7e-110 402.1 518 42.7
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 4.8e-108 396.0 557 43.1
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 5.1e-94 349.4 523 38.6
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.7e-85 319.3 540 38.0
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 9.7e-85 318.5 538 37.9
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 7.0e-83 312.4 574 35.7
Hma1.2p1_1796F.1_g302765 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.2e-70 269.6 389 40.4
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 4.0e-54 216.9 544 30.3
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.1e-51 208.8 527 31.1
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 3.2e-51 207.2 527 30.9
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 7.8e-50 202.6 553 29.5
Sed0017012 Sechium edule HOM05D007873 ORTHO05D008474 1.7e-49 201.4 436 34.6
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 3.0e-49 200.7 545 28.8
ClCG08G004160 Citrullus lanatus HOM05D007873 ORTHO05D008474 8.0e-47 192.6 258 36.4
MELO3C010591.2 Cucumis melo HOM05D007873 ORTHO05D008474 5.2e-46 189.9 267 35.6
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.9e-43 181.4 525 28.0
Sed0004801 Sechium edule HOM05D007873 ORTHO05D008474 4.1e-43 180.3 356 35.1
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 6.2e-39 166.4 544 25.7
Potri.006G027800 Populus trichocarpa HOM05D007873 ORTHO05D008474 1.6e-34 151.8 257 35.4
Potri.006G028000 Populus trichocarpa HOM05D007873 ORTHO05D008474 3.5e-34 150.6 258 35.3
Zm00001eb096930 Zea mays HOM05D007873 ORTHO05D008474 7.3e-32 142.9 542 25.6
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 4.7e-31 140.2 234 34.2
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 1.5e-29 135.2 400 28.5
Gorai.007G058500 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.7e-28 131.7 234 34.6
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-28 131.3 224 36.2
Sabra06G0020600 Salix brachista HOM05D007873 ORTHO05D008474 8.4e-28 129.4 222 34.2
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 2.4e-27 127.9 252 30.6
Sed0023660 Sechium edule HOM05D007873 ORTHO05D022399 3.5e-26 124.0 264 31.4
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.0e-26 123.2 237 37.6
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 1.7e-25 121.7 234 35.5
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.3e-25 121.3 262 33.6
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 2.3e-25 121.3 266 32.7
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 5.1e-25 120.2 274 30.7
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 6.6e-25 119.8 234 34.2
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 8.6e-25 119.4 233 35.2
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.5e-24 118.6 376 28.5
CsaV3_3G019020 Cucumis sativus L. HOM05D007873 ORTHO05D022399 6.2e-23 113.2 260 28.5
MELO3C019474.2 Cucumis melo HOM05D007873 ORTHO05D022399 2.4e-22 111.3 260 28.5
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 3.1e-22 110.9 263 31.9
ClCG05G009670 Citrullus lanatus HOM05D007873 ORTHO05D022399 9.0e-22 109.4 262 28.6
CsaV3_3G019050 Cucumis sativus L. HOM05D007873 ORTHO05D022399 1.5e-21 108.6 258 27.5
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.4e-21 107.5 236 31.8
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 1.1e-19 102.4 274 31.8
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 7.1e-19 99.8 341 28.2
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 1.2e-18 99.0 274 31.4
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 5.1e-17 93.6 250 31.2
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 6.6e-17 93.2 229 31.4
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 1.1e-16 92.4 237 32.5
Hma1.2p1_0128F.1_g060000 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.5e-16 92.0 124 38.7
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 3.3e-16 90.9 254 31.1
Duzib147G0130 Durio zibethinus HOM05D007873 ORTHO05D008474 5.6e-16 90.1 119 39.5
Sed0022005 Sechium edule HOM05D007873 ORTHO05D008474 5.6e-16 90.1 262 29.8
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 7.3e-16 89.7 240 33.3
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 2.1e-15 88.2 268 30.6
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.8e-14 85.1 255 30.6
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.4e-14 84.7 171 32.2
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 2.4e-14 84.7 278 30.6
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 4.0e-14 84.0 263 27.8
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 2.6e-13 81.3 243 30.0
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 9.9e-13 79.3 233 31.3
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.3e-12 79.0 206 31.6
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.7e-12 78.6 238 29.4
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 2.7e-10 71.2 199 28.1
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 7.9e-10 69.7 195 29.2
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 1.0e-09 69.3 202 29.7
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 6.7e-09 66.6 233 26.2
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 8.7e-09 66.2 235 26.4
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 4.3e-08 63.9 202 27.7
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 4.3e-08 63.9 222 29.7
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-07 62.4 256 26.2
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-07 62.4 256 26.2
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 2.1e-07 61.6 231 22.9
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 2.8e-07 61.2 270 23.3
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 3.7e-07 60.8 131 32.8
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 6.2e-07 60.1 204 28.9
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.4e-06 58.2 197 24.9
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 2.4e-06 58.2 195 26.2
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 2.4e-06 58.2 205 25.4
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.4e-06 58.2 210 26.2
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.4e-06 58.2 210 26.2
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 3.1e-06 57.8 203 24.6
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 5.3e-06 57.0 204 27.5


User provided reference genes

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