Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 7.2e-136 487.3 251 100.0
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 8.1e-79 297.7 303 56.8
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 7.7e-53 211.5 243 50.2
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 4.8e-47 192.2 243 46.1
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.8e-46 190.3 243 46.5
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 2.4e-46 189.9 246 47.2
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 2.1e-34 150.2 244 40.6
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 1.8e-25 120.6 166 42.8
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.4e-24 115.9 165 40.6
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 9.2e-22 108.2 187 38.0
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 1.6e-21 107.5 141 46.1
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 7.7e-21 105.1 256 32.8
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 1.5e-19 100.9 245 31.8
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 1.5e-19 100.9 164 36.0
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.3e-19 99.8 167 37.7
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 4.3e-19 99.4 177 38.4
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 5.6e-19 99.0 145 42.8
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 7.3e-19 98.6 165 40.0
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.1e-18 97.1 255 32.2
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 2.8e-18 96.7 160 40.0
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 4.7e-18 95.9 174 34.5
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 4.7e-18 95.9 166 34.3
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 1.0e-17 94.7 152 39.5
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.4e-17 94.4 247 33.2
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.8e-17 94.0 221 32.1
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 6.8e-17 92.0 159 39.6
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 1.3e-15 87.8 157 35.0
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 1.7e-15 87.4 155 32.3
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 2.9e-15 86.7 207 32.4
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 3.7e-15 86.3 263 31.6
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 4.9e-15 85.9 220 30.0
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 6.4e-15 85.5 171 32.2
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 1.1e-14 84.7 176 30.7
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-14 84.7 262 30.2
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.8e-14 84.0 130 36.2
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 5.4e-14 82.4 153 33.3
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 7.0e-14 82.0 183 35.5
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.2e-13 81.3 155 33.5
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.2e-13 81.3 155 33.5
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.6e-13 80.9 156 34.0
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 7.8e-13 78.6 158 34.2
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.7e-12 77.4 158 33.5
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.1e-11 74.7 158 32.9
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 1.5e-11 74.3 284 27.5
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 2.5e-11 73.6 130 36.9
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 4.3e-11 72.8 130 36.9
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.2e-10 71.2 212 28.8
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 2.1e-10 70.5 267 28.5
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 8.9e-09 65.1 163 31.3
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.3e-07 61.2 136 36.0
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 4.9e-07 59.3 127 37.0
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 4.9e-07 59.3 128 34.4
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 6.4e-07 58.9 147 34.0
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 6.4e-07 58.9 100 36.0
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 8.3e-07 58.5 191 27.7
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 1.4e-06 57.8 149 31.5
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 5.4e-06 55.8 142 32.4
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 7.0e-06 55.5 134 32.1


User provided reference genes

Program Settings