Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.8e-171 604.7 308 100.0
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 8.4e-110 401.0 293 72.0
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 1.8e-59 233.8 261 49.0
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 9.1e-56 221.5 249 49.0
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 1.2e-55 221.1 284 47.9
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.9e-54 216.5 264 47.3
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 3.8e-54 216.1 287 46.3
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 9.7e-50 201.4 262 46.9
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 9.7e-50 201.4 252 46.0
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 7.2e-45 185.3 238 46.2
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 1.4e-40 171.0 273 38.5
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 2.8e-36 156.8 248 41.1
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 2.6e-34 150.2 254 39.8
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 4.4e-34 149.4 253 37.5
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.8e-32 144.1 251 37.1
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 3.1e-32 143.3 253 39.1
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 5.9e-31 139.0 253 37.5
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.0e-30 138.3 278 36.7
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.3e-30 137.9 280 31.8
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 5.0e-30 136.0 282 31.9
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 8.6e-30 135.2 290 32.1
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 1.4e-27 127.9 312 34.6
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 8.9e-27 125.2 262 33.6
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.6e-26 123.6 253 31.6
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 4.4e-26 122.9 271 30.3
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 1.7e-25 120.9 278 34.5
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.9e-25 120.2 299 32.4
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-24 118.2 291 33.0
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 1.1e-24 118.2 264 30.7
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.4e-24 117.9 253 31.2
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.9e-24 117.5 165 40.6
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.4e-24 117.1 251 35.5
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 5.4e-24 115.9 267 30.7
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 1.6e-23 114.4 231 35.9
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 1.0e-22 111.7 227 36.6
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 6.6e-22 109.0 243 35.8
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 8.6e-22 108.6 267 30.7
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 3.3e-21 106.7 245 34.7
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.2e-20 104.8 232 34.9
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 1.8e-19 100.9 233 33.9
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 4.0e-19 99.8 258 29.1
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 4.0e-19 99.8 262 31.3
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 4.0e-19 99.8 262 31.3
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 5.2e-19 99.4 222 33.8
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.5e-18 97.8 230 33.5
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 2.0e-18 97.4 230 33.9
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 5.8e-18 95.9 262 31.7
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 5.8e-18 95.9 232 30.6
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.7e-17 94.4 257 30.0
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 2.2e-17 94.0 282 31.9
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 6.4e-17 92.4 231 34.2
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 1.9e-16 90.9 204 33.3
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 2.4e-16 90.5 224 35.3
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 2.4e-16 90.5 282 31.2
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 3.2e-16 90.1 196 36.7
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 5.4e-16 89.4 214 34.6
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 9.2e-16 88.6 196 34.2
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 9.2e-16 88.6 203 34.0
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 2.1e-15 87.4 211 31.3
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 2.1e-15 87.4 274 29.9
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 3.5e-15 86.7 299 27.4
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 3.5e-15 86.7 212 34.9
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 3.5e-15 86.7 271 31.4
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 7.8e-15 85.5 214 31.3
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 7.8e-15 85.5 264 26.5
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-14 84.7 276 28.3
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 3.0e-14 83.6 274 27.7
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 5.1e-14 82.8 274 26.6
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 8.6e-14 82.0 235 24.7
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 4.3e-13 79.7 154 38.3
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 7.3e-13 79.0 251 30.7
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 7.3e-13 79.0 255 27.8
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 7.3e-13 79.0 255 27.8
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 9.5e-13 78.6 272 29.4
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.2e-12 78.2 176 30.7
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.2e-12 78.2 176 30.7
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 2.1e-12 77.4 251 24.3
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.1e-12 77.4 272 29.4
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 1.8e-11 74.3 225 27.1
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 3.1e-11 73.6 235 27.7
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.1e-11 73.6 200 32.5
DCAR_028983 Daucus carota HOM05D008909 ORTHO05D008474 3.1e-11 73.6 221 30.8
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.0e-10 70.9 239 27.2
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.8e-10 69.3 214 26.2
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.4e-08 63.9 214 24.8
Ah.13g070230 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.1e-08 63.2 210 27.6
Sed0017012 Sechium edule HOM05D007873 ORTHO05D008474 3.5e-07 60.1 183 24.6
Hma1.2p1_0383F.1_g140640 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.0e-06 58.5 80 40.0
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 5.1e-06 56.2 206 27.7


User provided reference genes

Program Settings