Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G002300 Citrullus lanatus HOM05D002165 ORTHO05D001531 7.7e-76 287.3 176 100.0
ClCG08G002330 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.6e-36 155.2 176 56.8
ClCG08G002370 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.6e-36 155.2 176 56.8
ClCG08G002340 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.0e-35 154.1 176 56.2
CsaV3_6G002620 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.2e-31 140.6 69 91.3
ClCG08G002280 Citrullus lanatus HOM05D002165 ORTHO05D001531 7.6e-31 137.9 69 91.3
CsaV3_6G002650 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.9e-31 137.5 69 88.4
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.7e-30 136.7 69 88.4
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.2e-29 132.5 79 77.2
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.4e-29 131.7 69 87.0
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.0e-27 125.9 62 90.3
MELO3C025021.2 Cucumis melo HOM05D002165 ORTHO05D001531 6.6e-27 124.8 62 88.7
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 5.8e-23 111.7 69 73.9
Sed0027158 Sechium edule HOM05D002165 ORTHO05D001531 1.4e-21 107.1 79 83.5
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.2e-21 105.9 69 72.5
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.2e-21 105.9 69 72.5
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.2e-21 105.9 69 72.5
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 9.3e-21 104.4 61 72.1
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.2e-20 104.0 66 72.7
Sed0012842 Sechium edule HOM05D002165 ORTHO05D001531 6.0e-20 101.7 62 72.6
Sed0013340 Sechium edule HOM05D002165 ORTHO05D001531 7.8e-20 101.3 62 74.2
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 8.7e-19 97.8 79 62.0
Sed0011742 Sechium edule HOM05D002165 ORTHO05D001531 1.1e-18 97.4 77 72.7
ClCG03G017890 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.9e-18 96.7 60 73.3
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 1.9e-18 96.7 61 72.1
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 7.3e-18 94.7 59 74.6
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.6e-17 92.4 59 72.9
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 3.1e-16 89.4 62 67.7
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 5.8e-15 85.1 163 38.7
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.4e-08 63.9 62 53.2
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.8e-08 63.5 57 59.6
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 3.1e-08 62.8 58 53.4
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.0e-08 62.4 52 53.8
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 5.3e-08 62.0 60 55.0
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 5.3e-08 62.0 60 55.0
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 6.9e-08 61.6 63 54.0
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.9e-08 61.6 59 47.5
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 9.0e-08 61.2 58 51.7
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 9.0e-08 61.2 58 51.7
Sed0016802 Sechium edule HOM05D002165 ORTHO05D001531 9.0e-08 61.2 77 42.9
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.2e-07 60.8 47 61.7
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.2e-07 60.8 45 57.8
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-07 60.8 58 51.7
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-07 60.8 58 51.7
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-07 60.8 58 51.7
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.5e-07 60.5 43 60.5
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.5e-07 60.5 43 60.5
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.5e-07 60.5 57 56.1
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-07 60.5 52 51.9
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 1.5e-07 60.5 49 59.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 1.5e-07 60.5 56 53.6
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 2.0e-07 60.1 57 56.1
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.0e-07 60.1 57 56.1
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 2.6e-07 59.7 57 56.1
ClCG02G014640 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-07 59.7 36 72.2
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 2.6e-07 59.7 56 53.6
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 4.5e-07 58.9 54 57.4
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 4.5e-07 58.9 54 57.4
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 4.5e-07 58.9 54 57.4
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 4.5e-07 58.9 113 32.7
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 4.5e-07 58.9 77 45.5
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 4.5e-07 58.9 72 47.2
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 5.8e-07 58.5 80 47.5
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 5.8e-07 58.5 44 63.6
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 7.6e-07 58.2 43 65.1
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 9.9e-07 57.8 66 50.0
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 9.9e-07 57.8 50 60.0
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 9.9e-07 57.8 55 54.5
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 9.9e-07 57.8 58 53.4
Sed0018176 Sechium edule HOM05D002165 ORTHO05D001531 9.9e-07 57.8 59 49.2
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.3e-06 57.4 55 54.5
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 1.3e-06 57.4 44 61.4
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 1.7e-06 57.0 54 55.6
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 1.7e-06 57.0 54 55.6
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 1.7e-06 57.0 54 55.6
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-06 57.0 79 41.8
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 2.2e-06 56.6 80 45.0
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.2e-06 56.6 79 41.8
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.2e-06 56.6 79 41.8
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.2e-06 56.6 79 41.8
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.9e-06 56.2 79 41.8
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 4.9e-06 55.5 54 53.7
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 4.9e-06 55.5 54 53.7
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 4.9e-06 55.5 54 53.7
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 4.9e-06 55.5 54 53.7
Ah.10g026790 Amaranthus hybridus HOM05D002165 ORTHO05D001531 6.4e-06 55.1 54 50.0
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 6.4e-06 55.1 58 53.4
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 6.4e-06 55.1 54 53.7
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 8.4e-06 54.7 54 53.7
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 8.4e-06 54.7 52 55.8
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 8.4e-06 54.7 41 63.4
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 8.4e-06 54.7 49 57.1


User provided reference genes

Program Settings