Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G002200 Citrullus lanatus HOM05D025194 ORTHO05D017844 1.5e-267 925.6 466 100.0
ClCG07G006090 Citrullus lanatus HOM05D025194 ORTHO05D017844 8.9e-79 298.5 417 49.4
MELO3C005820.2 Cucumis melo HOM05D012996 ORTHO05D000482 3.3e-25 120.6 367 30.0
CsaV3_5G001270 Cucumis sativus L. HOM05D012996 ORTHO05D000482 3.3e-25 120.6 327 30.6
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 9.6e-25 119.0 230 35.2
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 9.6e-25 119.0 230 35.2
ClCG07G006540 Citrullus lanatus HOM05D038748 ORTHO05D017844 4.8e-24 116.7 241 32.4
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 4.5e-14 83.6 215 29.8
ClCG10G009800 Citrullus lanatus HOM05D039719 ORTHO05D017844 1.1e-12 79.0 263 25.5
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 7.2e-12 76.3 246 29.3
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 6.1e-11 73.2 251 27.1
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 6.1e-11 73.2 261 28.4
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 7.9e-11 72.8 251 26.7
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.9e-11 72.8 246 28.5
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.0e-10 72.4 235 25.1
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.3e-10 71.2 314 26.8
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.3e-10 71.2 252 28.2
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.0e-10 70.9 252 28.2
ClCG09G012000 Citrullus lanatus HOM05D012996 ORTHO05D000482 8.7e-10 69.3 166 32.5
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 8.7e-10 69.3 224 25.4
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.5e-09 68.6 246 28.0
CsaV3_3G031520 Cucumis sativus L. HOM05D010240 ORTHO05D010739 1.9e-09 68.2 157 29.9
ClCG08G003750 Citrullus lanatus HOM05D012996 ORTHO05D017844 2.5e-09 67.8 208 28.4
CsaV3_5G014580 Cucumis sativus L. HOM05D010240 ORTHO05D010739 2.5e-09 67.8 177 29.4
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 3.3e-09 67.4 232 26.7
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 4.3e-09 67.0 225 28.0
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.3e-09 67.0 232 26.7
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 5.7e-09 66.6 232 27.2
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.4e-09 66.2 425 24.0
PGSC0003DMG400041208 Solanum tuberosum HOM05D000679 ORTHO05D000482 1.3e-08 65.5 156 31.4
ClCG10G006120 Citrullus lanatus HOM05D025561 ORTHO05D149742 1.6e-08 65.1 115 42.6
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 2.2e-08 64.7 237 26.6
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 2.8e-08 64.3 221 28.1
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-08 64.3 215 25.6
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.8e-08 64.3 314 26.1
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-08 63.9 235 28.1
TWI74G0172 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.7e-08 63.9 178 30.9
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.8e-08 63.5 232 28.4
TWI77G0421 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.8e-08 63.5 177 31.1
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 8.2e-08 62.8 227 25.1
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-07 62.4 221 26.2
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 2.4e-07 61.2 221 27.6
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 3.1e-07 60.8 232 26.3
ClCG08G000840 Citrullus lanatus HOM05D017840 ORTHO05D015613 4.1e-07 60.5 111 32.4
Nitab4.5_0004808g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.1e-07 60.5 231 26.8
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.1e-07 60.5 221 27.6
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.1e-07 60.5 232 26.7
CsaV3_3G022130 Cucumis sativus L. HOM05D019956 ORTHO05D015613 5.3e-07 60.1 71 36.6
Nitab4.5_0009593g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.9e-07 59.7 223 26.5
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.0e-07 59.3 215 26.0
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 1.5e-06 58.5 276 26.8
Nitab4.5_0014929g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.5e-06 58.5 217 27.2
Oeu037089.1 Olea europaea HOM05D002262 ORTHO05D000708 1.5e-06 58.5 225 24.4
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.5e-06 58.5 221 27.1
ClCG11G012240 Citrullus lanatus HOM05D024078 ORTHO05D150445 2.0e-06 58.2 272 27.6
Nitab4.5_0011972g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-06 58.2 227 26.0
ClCG04G002880 Citrullus lanatus HOM05D012996 ORTHO05D010404 4.5e-06 57.0 203 27.6
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 5.9e-06 56.6 212 24.5
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.9e-06 56.6 150 28.7
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.9e-06 56.6 220 27.3


User provided reference genes

Program Settings