Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 8.2e-42 173.3 89 100.0
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 9.4e-22 106.7 60 88.3
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.8e-17 92.4 60 76.7
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 1.6e-13 79.3 59 67.8
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.6e-13 79.3 60 65.0
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 4.0e-12 74.7 64 56.2
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 1.5e-11 72.8 60 60.0
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.6e-11 72.0 64 57.8
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.4e-11 71.2 60 58.3
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.4e-11 71.2 60 58.3
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 4.4e-11 71.2 64 57.8
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 4.4e-11 71.2 63 60.3
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 7.5e-11 70.5 60 61.7
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 9.8e-11 70.1 59 55.9
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 9.8e-11 70.1 60 58.3
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.3e-10 69.7 60 56.7
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 2.2e-10 68.9 60 56.7
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.2e-10 68.9 60 56.7
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 2.8e-10 68.6 60 60.0
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 2.8e-10 68.6 60 55.0
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 3.7e-10 68.2 59 61.0
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 4.9e-10 67.8 58 60.3
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 4.9e-10 67.8 58 60.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 4.9e-10 67.8 58 60.3
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 6.3e-10 67.4 59 57.6
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 6.3e-10 67.4 64 54.7
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 8.3e-10 67.0 60 55.0
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 1.1e-09 66.6 57 59.6
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 1.4e-09 66.2 59 55.9
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.8e-09 65.9 64 51.6
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.8e-09 65.9 60 55.0
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 4.1e-09 64.7 59 55.9
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 5.4e-09 64.3 60 51.7
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 5.4e-09 64.3 59 54.2
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 7.0e-09 63.9 57 54.4
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 7.0e-09 63.9 58 56.9
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 9.2e-09 63.5 60 50.0
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 9.2e-09 63.5 60 51.7
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 9.2e-09 63.5 64 51.6
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 1.6e-08 62.8 60 53.3
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 2.0e-08 62.4 43 69.8
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 2.0e-08 62.4 58 56.9
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 2.0e-08 62.4 60 51.7
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 2.7e-08 62.0 60 51.7
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 2.7e-08 62.0 59 55.9
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 3.5e-08 61.6 59 55.9
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 4.5e-08 61.2 60 56.7
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 4.5e-08 61.2 60 51.7
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 4.5e-08 61.2 60 50.0
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 5.9e-08 60.8 60 46.7
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 5.9e-08 60.8 60 48.3
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 7.8e-08 60.5 60 50.0
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.0e-07 60.1 59 49.2
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.3e-07 59.7 63 46.0
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.3e-07 59.7 60 46.7
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 2.3e-07 58.9 60 48.3
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 2.3e-07 58.9 59 52.5
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 5.0e-07 57.8 60 45.0
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 5.0e-07 57.8 60 55.0
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 6.6e-07 57.4 60 43.3
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 6.6e-07 57.4 64 45.3
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 6.6e-07 57.4 54 51.9
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 8.6e-07 57.0 64 46.9
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 1.5e-06 56.2 58 48.3
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 2.5e-06 55.5 55 47.3
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 2.5e-06 55.5 60 45.0
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.3e-06 55.1 54 48.1
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 4.3e-06 54.7 59 42.4
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 5.6e-06 54.3 55 50.9
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 9.5e-06 53.5 54 44.4


User provided reference genes

Program Settings