Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 5.2e-218 760.8 382 100.0
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 2.9e-184 648.7 338 95.6
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 6.0e-182 641.0 338 94.1
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 3.6e-171 605.1 338 89.3
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 6.0e-158 561.2 342 81.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.0e-157 560.5 336 81.5
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 5.1e-157 558.1 338 81.4
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 7.3e-156 554.3 339 79.6
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.6e-155 553.1 337 81.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.6e-155 552.0 335 82.4
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.4e-154 550.1 339 81.7
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.4e-154 550.1 336 80.1
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 4.0e-154 548.5 337 81.3
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 6.9e-154 547.7 338 79.6
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 9.0e-154 547.4 334 80.5
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 9.0e-154 547.4 338 78.1
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.5e-153 546.6 337 80.7
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.6e-153 545.8 335 81.8
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.4e-153 545.4 340 78.8
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.5e-153 545.0 338 78.1
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 5.8e-153 544.7 334 78.7
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 7.6e-153 544.3 345 79.1
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 9.9e-153 543.9 336 81.2
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.3e-152 543.5 334 79.6
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.3e-152 543.5 343 79.3
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.2e-152 542.7 349 77.4
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 2.9e-152 542.3 352 76.7
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.9e-152 542.3 336 80.7
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.9e-152 541.6 339 77.6
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 4.9e-152 541.6 335 79.1
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 8.4e-152 540.8 336 80.7
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 8.4e-152 540.8 334 79.6
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.1e-151 540.4 338 79.0
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.4e-151 540.0 333 78.1
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.9e-151 539.7 333 78.7
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.2e-151 538.9 336 80.4
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 4.2e-151 538.5 323 80.2
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 4.2e-151 538.5 341 76.0
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 5.4e-151 538.1 339 79.4
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 7.1e-151 537.7 335 79.1
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 9.3e-151 537.3 333 77.2
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 9.3e-151 537.3 343 79.3
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.2e-150 537.0 347 75.5
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.1e-150 536.2 335 78.5
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 2.7e-150 535.8 338 76.6
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 2.7e-150 535.8 335 77.3
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.0e-150 534.6 379 72.8
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 7.9e-150 534.3 335 78.5
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.8e-149 533.1 334 78.7
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 2.3e-149 532.7 335 77.6
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 2.3e-149 532.7 335 78.2
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 3.0e-149 532.3 335 77.6
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 3.0e-149 532.3 335 77.6
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 3.9e-149 531.9 335 77.6
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 6.7e-149 531.2 335 79.1
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.9e-148 529.6 337 77.2
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.9e-148 529.6 346 76.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 2.5e-148 529.3 335 77.3
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 7.4e-148 527.7 345 77.7
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 7.4e-148 527.7 334 77.2
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.3e-147 526.9 335 77.0
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.3e-147 526.9 334 77.2
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.6e-147 526.6 322 79.2
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.6e-147 526.6 334 76.6
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 4.0e-146 521.9 336 77.4
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.2e-145 520.4 347 75.2
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.2e-145 520.4 339 75.5
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.0e-145 519.6 385 68.1
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.7e-144 516.5 299 83.6
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 2.9e-144 515.8 332 76.2
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 7.1e-143 511.1 365 73.4
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 7.1e-143 511.1 336 74.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 3.5e-142 508.8 339 72.9
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.8e-139 499.2 339 72.0
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.8e-139 498.4 334 72.8
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 5.3e-138 495.0 331 72.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 5.3e-138 495.0 334 74.9
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.5e-137 493.4 338 72.5
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 5.0e-136 488.4 338 74.9
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 5.5e-135 485.0 339 70.8
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 5.7e-132 474.9 339 69.6
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.0e-129 466.5 334 70.4
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.0e-128 464.2 263 86.7
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 1.4e-127 460.3 311 70.4
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 9.4e-127 457.6 341 65.4
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.7e-124 447.6 366 65.0
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.4e-122 443.0 344 64.0
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.1e-117 425.2 334 66.2
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.7e-115 420.2 336 65.8
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 8.2e-115 417.9 337 65.3
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 8.2e-115 417.9 316 63.6
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.1e-114 416.0 246 82.5
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 8.0e-110 401.4 228 84.2
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 3.0e-109 399.4 362 61.6
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 5.2e-109 398.7 527 47.4
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.1e-106 389.0 334 61.4
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 3.5e-105 386.0 222 84.2
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.5e-100 370.5 248 75.8
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 5.7e-84 315.5 192 80.2
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 7.5e-84 315.1 339 52.8
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.6e-72 275.4 165 78.8
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.3e-71 273.1 177 76.3
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.6e-70 270.8 220 59.5
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.4e-68 263.1 356 40.7
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 2.3e-61 240.4 328 42.7
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.1e-56 222.6 122 83.6
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.3e-55 219.5 127 84.3
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 6.0e-49 199.1 326 38.0
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 4.8e-46 189.5 343 35.3
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.1e-45 186.8 126 71.4
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.6e-39 166.0 97 80.4
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.1e-34 151.8 83 88.0
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.1e-33 147.5 94 68.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 2.5e-26 124.0 92 64.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.4e-20 103.6 52 90.4
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.9e-19 100.5 76 65.8
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 7.9e-17 92.4 56 87.5
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 1.2e-12 78.6 141 39.7
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 6.5e-11 72.8 41 75.6
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 9.7e-07 58.9 59 47.5
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 1.7e-06 58.2 30 86.7


User provided reference genes

Program Settings