Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 3.1e-78 295.0 147 100.0
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 3.8e-44 181.8 104 86.5
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 4.2e-43 178.3 104 84.6
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 1.6e-42 176.4 104 83.7
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 8.2e-31 137.5 93 73.1
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 8.2e-31 137.5 93 67.7
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 3.1e-30 135.6 82 76.8
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 4.1e-30 135.2 96 68.8
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 4.1e-30 135.2 93 71.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 7.0e-30 134.4 97 68.0
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 7.0e-30 134.4 93 71.0
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 2.0e-29 132.9 88 71.6
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.0e-29 132.9 87 71.3
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 2.0e-29 132.9 106 62.3
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 2.7e-29 132.5 93 71.0
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.7e-29 132.5 97 68.0
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 4.5e-29 131.7 105 62.9
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 5.9e-29 131.3 105 61.9
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 5.9e-29 131.3 83 75.9
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.0e-28 130.6 105 61.9
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 1.3e-28 130.2 104 63.5
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 1.3e-28 130.2 104 63.5
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.3e-28 130.2 83 72.3
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 1.3e-28 130.2 106 64.2
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.7e-28 129.8 82 73.2
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 1.7e-28 129.8 82 73.2
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.7e-28 129.8 79 75.9
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.7e-28 129.8 106 63.2
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 2.2e-28 129.4 81 75.3
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 2.2e-28 129.4 105 63.8
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.9e-28 129.0 96 66.7
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 3.8e-28 128.6 83 71.1
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 3.8e-28 128.6 82 74.4
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 3.8e-28 128.6 81 75.3
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 5.0e-28 128.3 82 75.6
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 5.0e-28 128.3 111 59.5
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 6.5e-28 127.9 103 63.1
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 6.5e-28 127.9 82 73.2
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 8.5e-28 127.5 89 68.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 8.5e-28 127.5 82 69.5
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-27 127.1 104 58.7
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.5e-27 126.7 109 59.6
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 1.9e-27 126.3 105 61.0
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.9e-27 126.3 105 61.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.9e-27 126.3 105 61.0
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.9e-27 126.3 93 63.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 1.9e-27 126.3 85 68.2
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 2.5e-27 125.9 112 58.9
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 2.5e-27 125.9 82 70.7
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.5e-27 125.9 102 61.8
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 2.5e-27 125.9 89 70.8
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 2.5e-27 125.9 82 72.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 3.2e-27 125.6 82 72.0
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 3.2e-27 125.6 105 61.9
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 4.2e-27 125.2 94 63.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 4.2e-27 125.2 104 57.7
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.2e-27 125.2 94 67.0
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 4.2e-27 125.2 89 67.4
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 4.2e-27 125.2 92 66.3
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 5.5e-27 124.8 93 64.5
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 5.5e-27 124.8 82 72.0
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 7.2e-27 124.4 93 60.2
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 7.2e-27 124.4 105 61.9
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 9.4e-27 124.0 82 72.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 9.4e-27 124.0 82 70.7
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.2e-26 123.6 82 70.7
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.6e-26 123.2 119 53.8
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.6e-26 123.2 119 53.8
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 1.6e-26 123.2 84 66.7
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.6e-26 123.2 82 70.7
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 1.6e-26 123.2 89 66.3
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.6e-26 123.2 82 72.0
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.1e-26 122.9 82 70.7
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 2.7e-26 122.5 82 68.3
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 2.7e-26 122.5 85 64.7
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 2.7e-26 122.5 82 69.5
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 3.6e-26 122.1 82 67.1
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 3.6e-26 122.1 82 67.1
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 3.6e-26 122.1 82 67.1
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 3.6e-26 122.1 79 72.2
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 3.6e-26 122.1 82 65.9
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 4.7e-26 121.7 110 57.3
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 4.7e-26 121.7 82 70.7
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 8.0e-26 120.9 82 69.5
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.0e-25 120.6 82 68.3
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 1.0e-25 120.6 91 63.7
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.0e-25 120.6 82 69.5
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.4e-25 120.2 82 70.7
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 4.0e-25 118.6 98 57.1
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 8.8e-25 117.5 82 68.3
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 8.8e-25 117.5 93 58.1
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.2e-24 117.1 82 65.9
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 1.5e-24 116.7 82 65.9
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 5.7e-24 114.8 93 59.1
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 5.7e-24 114.8 98 57.1
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 7.5e-24 114.4 83 67.5
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 3.7e-23 112.1 88 60.2
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.4e-22 110.2 79 67.1
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 3.5e-21 105.5 107 46.7
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 7.7e-21 104.4 77 66.2
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.3e-20 102.8 85 54.1
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 3.8e-20 102.1 82 57.3
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 3.6e-18 95.5 89 46.1
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 4.7e-18 95.1 93 50.5
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 8.0e-18 94.4 61 72.1
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.0e-17 92.0 82 47.6
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 8.9e-17 90.9 82 46.3
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 2.0e-16 89.7 105 46.7
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 4.4e-16 88.6 82 50.0
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.4e-14 83.6 69 56.5
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 5.9e-13 78.2 84 42.9
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 3.6e-10 68.9 85 42.4
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 5.2e-09 65.1 82 35.4
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 1.2e-08 63.9 80 38.8


User provided reference genes

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