Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 1.6e-206 722.6 380 100.0
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.3e-120 437.2 360 72.8
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 2.0e-81 307.0 370 56.2
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 8.3e-75 285.0 301 54.8
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.1e-74 284.6 295 55.9
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 1.8e-74 283.9 281 58.0
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 3.1e-74 283.1 284 56.3
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 4.1e-74 282.7 281 57.7
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 9.1e-74 281.6 313 51.1
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 9.1e-74 281.6 318 52.5
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 9.1e-74 281.6 270 57.4
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 2.0e-73 280.4 273 58.2
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 3.5e-73 279.6 312 52.6
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 2.3e-72 276.9 281 57.3
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 4.2e-71 272.7 280 55.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 1.0e-69 268.1 286 55.2
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 2.3e-69 266.9 332 50.9
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 5.2e-69 265.8 280 54.3
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 6.8e-69 265.4 303 52.1
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 6.8e-69 265.4 282 53.2
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 6.8e-69 265.4 272 55.1
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.5e-68 264.2 284 53.5
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.5e-68 264.2 272 54.4
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.5e-68 264.2 280 53.6
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 2.6e-68 263.5 326 49.4
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 4.4e-68 262.7 286 53.1
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 1.3e-67 261.2 303 50.5
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.7e-67 260.8 280 52.9
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 2.2e-67 260.4 280 52.1
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 2.8e-67 260.0 272 52.9
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 2.8e-67 260.0 272 54.8
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 6.3e-67 258.8 278 53.6
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.8e-66 257.3 285 53.0
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 3.1e-66 256.5 281 54.4
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 5.4e-66 255.8 278 52.9
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 7.0e-66 255.4 283 52.3
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 9.2e-66 255.0 283 51.9
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 2.7e-65 253.4 273 53.5
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 4.5e-65 252.7 259 55.2
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 5.9e-65 252.3 278 52.2
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 5.9e-65 252.3 278 52.2
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 5.9e-65 252.3 278 52.2
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 1.7e-64 250.8 282 52.5
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 2.9e-64 250.0 271 52.8
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.9e-63 247.3 269 50.9
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 7.3e-63 245.4 287 52.3
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 9.5e-63 245.0 271 53.1
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 9.5e-63 245.0 305 47.5
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 2.2e-59 233.8 277 50.9
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 4.1e-58 229.6 281 49.8
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 5.4e-58 229.2 207 58.5
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 7.8e-57 225.3 244 53.3
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.3e-56 224.6 274 48.9
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.9e-55 220.7 208 58.2
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.9e-55 220.7 207 58.9
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 2.5e-55 220.3 237 51.5
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 2.8e-54 216.9 203 57.6
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 8.0e-54 215.3 250 49.6
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 3.7e-51 206.5 201 54.7
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 5.1e-48 196.1 271 42.8
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 5.6e-47 192.6 278 43.5
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 4.4e-44 183.0 274 39.8
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 8.3e-43 178.7 168 56.0
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 6.0e-41 172.6 289 36.3
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 1.3e-27 128.3 132 56.1
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 3.8e-27 126.7 143 50.3
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 8.4e-27 125.6 129 52.7
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 5.6e-23 112.8 258 31.4
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 1.3e-22 111.7 121 53.7
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 1.8e-21 107.8 169 43.2
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.3e-19 101.7 127 48.0
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 5.4e-18 96.3 101 50.5
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 4.0e-13 80.1 103 49.5
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 9.0e-13 79.0 137 37.2
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 8.7e-08 62.4 317 27.4


User provided reference genes

Program Settings