Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 9.4e-89 330.1 160 100.0
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 9.5e-65 250.4 163 79.1
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 5.8e-62 241.1 159 79.9
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 7.8e-59 230.7 162 71.6
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 4.6e-35 151.8 107 69.2
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 6.0e-35 151.4 100 70.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 2.3e-34 149.4 94 76.6
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 3.9e-34 148.7 134 54.5
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 5.1e-34 148.3 146 54.1
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.1e-33 147.1 161 48.4
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.5e-33 146.7 111 64.9
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.5e-33 146.7 111 64.9
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.5e-33 146.7 111 64.9
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.9e-33 146.4 145 51.0
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 2.5e-33 146.0 100 68.0
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 3.3e-33 145.6 98 68.4
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 4.3e-33 145.2 114 60.5
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 9.6e-33 144.1 112 63.4
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 9.6e-33 144.1 164 50.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.6e-32 143.3 97 69.1
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 2.1e-32 142.9 109 63.3
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 2.1e-32 142.9 140 52.1
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 6.2e-32 141.4 92 71.7
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 8.1e-32 141.0 104 67.3
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.8e-31 139.8 100 65.0
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.8e-31 139.8 111 61.3
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 2.4e-31 139.4 110 61.8
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.4e-31 139.4 97 68.0
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 3.1e-31 139.0 144 50.7
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 4.0e-31 138.7 161 49.1
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 5.3e-31 138.3 108 59.3
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 6.9e-31 137.9 116 62.1
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 9.0e-31 137.5 106 61.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 9.0e-31 137.5 105 60.0
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 9.0e-31 137.5 113 58.4
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 9.0e-31 137.5 118 60.2
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 1.2e-30 137.1 102 63.7
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 1.5e-30 136.7 95 66.3
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.0e-30 136.3 87 73.6
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.6e-30 136.0 93 67.7
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.6e-30 136.0 93 67.7
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 2.6e-30 136.0 115 57.4
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 2.6e-30 136.0 101 65.3
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.4e-30 135.6 93 67.7
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 4.5e-30 135.2 110 57.3
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.8e-30 134.8 143 51.0
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 7.6e-30 134.4 101 62.4
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 7.6e-30 134.4 101 62.4
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 7.6e-30 134.4 101 62.4
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 7.6e-30 134.4 95 67.4
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 7.6e-30 134.4 96 63.5
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 9.9e-30 134.0 95 68.4
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 9.9e-30 134.0 101 62.4
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 9.9e-30 134.0 101 62.4
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 9.9e-30 134.0 91 71.4
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 9.9e-30 134.0 109 59.6
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 9.9e-30 134.0 95 68.4
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 9.9e-30 134.0 95 68.4
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 9.9e-30 134.0 95 66.3
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.3e-29 133.7 95 66.3
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 1.3e-29 133.7 114 57.9
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.3e-29 133.7 97 66.0
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.3e-29 133.7 100 63.0
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.7e-29 133.3 107 60.7
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.7e-29 133.3 97 67.0
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 2.2e-29 132.9 93 68.8
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 2.2e-29 132.9 95 65.3
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.9e-29 132.5 91 69.2
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 3.8e-29 132.1 98 67.3
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 3.8e-29 132.1 93 69.9
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 4.9e-29 131.7 90 71.1
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 6.4e-29 131.3 87 71.3
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 8.4e-29 131.0 100 62.0
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 8.4e-29 131.0 87 72.4
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 8.4e-29 131.0 137 51.1
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 8.4e-29 131.0 100 63.0
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 1.1e-28 130.6 100 62.0
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.9e-28 129.8 119 58.0
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.4e-28 129.4 84 70.2
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 3.2e-28 129.0 88 70.5
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 5.4e-28 128.3 86 68.6
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 1.2e-27 127.1 98 60.2
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 1.6e-27 126.7 93 65.6
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 2.7e-27 125.9 99 62.6
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 4.6e-27 125.2 93 66.7
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.3e-26 123.6 79 73.4
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.3e-26 123.6 106 58.5
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 5.1e-26 121.7 101 61.4
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 8.7e-26 120.9 75 73.3
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 2.5e-20 102.8 100 52.0
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 2.5e-20 102.8 100 52.0
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 1.6e-19 100.1 80 57.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 2.7e-19 99.4 88 53.4
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 4.6e-19 98.6 79 54.4
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.8e-18 96.7 93 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 3.9e-18 95.5 97 46.4
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 5.1e-18 95.1 95 50.5
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.1e-17 94.0 116 41.4
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.4e-15 87.0 72 59.7
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.8e-10 70.1 68 51.5
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 4.3e-09 65.5 48 64.6


User provided reference genes

Program Settings