Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 8.9e-47 190.3 122 100.0
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.6e-43 179.5 122 95.1
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.1e-43 179.1 122 78.7
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.5e-38 162.9 119 90.8
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 7.1e-28 127.5 117 59.0
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.1e-27 125.9 114 57.0
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 3.5e-27 125.2 119 56.3
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 4.6e-27 124.8 111 58.6
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 4.6e-27 124.8 111 58.6
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 4.6e-27 124.8 119 60.5
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 6.0e-27 124.4 121 55.4
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 6.0e-27 124.4 121 55.4
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 7.8e-27 124.0 117 56.4
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.0e-26 123.6 117 56.4
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.0e-26 123.6 117 56.4
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-26 123.6 119 70.6
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.0e-26 123.6 121 55.4
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.0e-26 123.6 120 53.3
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.0e-26 123.6 116 72.4
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.3e-26 123.2 89 68.5
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.3e-26 123.2 109 58.7
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.3e-26 123.2 120 55.8
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.7e-26 122.9 121 55.4
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 2.3e-26 122.5 89 69.7
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 2.3e-26 122.5 109 59.6
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 5.1e-26 121.3 114 55.3
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 5.1e-26 121.3 121 57.0
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 5.1e-26 121.3 120 56.7
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.1e-26 121.3 89 66.3
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.5e-25 119.8 119 54.6
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 2.5e-25 119.0 111 54.1
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.5e-25 119.0 118 55.9
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 3.3e-25 118.6 110 56.4
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.3e-25 118.6 110 55.5
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 4.3e-25 118.2 118 53.4
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 5.6e-25 117.9 89 67.4
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 5.6e-25 117.9 111 56.8
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 5.6e-25 117.9 87 65.5
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.3e-25 117.5 85 67.1
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 7.3e-25 117.5 118 54.2
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 9.6e-25 117.1 116 54.3
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.3e-24 116.7 114 54.4
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-24 116.3 121 52.9
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-24 116.3 121 52.9
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.6e-24 116.3 121 51.2
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.6e-24 116.3 89 65.2
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.1e-24 115.9 121 51.2
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 2.1e-24 115.9 111 55.0
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 2.1e-24 115.9 87 66.7
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.1e-24 115.9 108 55.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.1e-24 115.9 119 51.3
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.8e-24 115.5 119 71.4
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.6e-24 115.2 117 53.8
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.6e-24 115.2 111 72.1
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 4.8e-24 114.8 116 70.7
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 4.8e-24 114.8 120 54.2
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 4.8e-24 114.8 107 55.1
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 6.2e-24 114.4 110 54.5
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 6.2e-24 114.4 116 52.6
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 8.1e-24 114.0 121 52.1
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.1e-23 113.6 86 64.0
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.8e-23 112.8 89 65.2
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 2.4e-23 112.5 110 53.6
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.1e-23 112.1 114 67.5
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-23 111.7 116 53.4
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-23 111.7 116 53.4
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 6.9e-23 110.9 89 60.7
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.2e-22 110.2 110 52.7
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.2e-22 110.2 87 62.1
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 1.2e-22 110.2 109 53.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.5e-22 109.8 111 53.2
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 1.5e-22 109.8 124 49.2
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.5e-22 109.8 111 52.3
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.0e-22 109.4 80 66.2
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.0e-22 109.4 78 66.7
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.6e-22 109.0 76 72.4
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-22 109.0 80 71.2
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 5.8e-22 107.8 111 52.3
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 7.6e-22 107.5 80 70.0
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 9.9e-22 107.1 105 73.3
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 9.9e-22 107.1 111 52.3
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 9.9e-22 107.1 111 52.3
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-21 106.7 89 65.2
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 3.8e-21 105.1 85 62.4
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 3.8e-21 105.1 111 51.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 4.9e-21 104.8 92 59.8
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.4e-20 103.2 92 58.7
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 1.9e-20 102.8 108 67.6
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.9e-20 102.8 108 67.6
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.9e-20 102.8 74 67.6
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 2.4e-20 102.4 117 47.9
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.4e-20 102.4 79 63.3
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.4e-20 102.4 74 66.2
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.4e-20 102.4 105 53.3
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 2.4e-20 102.4 121 47.1
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 9.3e-20 100.5 78 60.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 9.3e-20 100.5 78 60.3
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.2e-19 100.1 89 59.6
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.6e-19 99.8 78 59.0
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.1e-19 99.4 71 66.2
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 2.7e-19 99.0 73 64.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.7e-19 99.0 75 69.3
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 3.5e-19 98.6 108 64.8
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 4.6e-19 98.2 71 66.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 4.6e-19 98.2 71 66.2
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 7.9e-19 97.4 79 59.5
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 7.9e-19 97.4 84 53.6
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.0e-18 97.1 59 78.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-18 97.1 59 78.0
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.3e-18 96.7 73 63.0
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.3e-18 96.7 73 63.0
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 4.3e-17 91.7 66 63.6
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 9.6e-17 90.5 89 76.4
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 9.6e-17 90.5 88 48.9
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 9.6e-17 90.5 85 56.5
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 9.9e-14 80.5 76 55.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.3e-13 80.1 71 50.7
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.7e-13 79.7 80 58.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 8.4e-13 77.4 76 55.3
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 8.4e-13 77.4 76 53.9
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 5.4e-12 74.7 76 51.3
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 5.4e-12 74.7 76 51.3
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 9.3e-12 73.9 78 44.9
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 2.7e-11 72.4 81 42.0
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.5e-09 66.6 81 38.3
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.9e-09 66.2 43 74.4
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 3.3e-09 65.5 44 65.9


User provided reference genes

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