Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 7.2e-59 230.3 113 100.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 1.0e-52 209.9 112 89.3
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 2.3e-49 198.7 113 85.0
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.6e-48 195.3 112 86.6
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 3.1e-38 161.8 107 70.1
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 2.5e-35 152.1 107 66.4
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 4.2e-35 151.4 107 65.4
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.2e-34 149.8 107 61.7
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.2e-34 149.8 107 64.5
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.1e-34 149.1 107 62.6
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 6.1e-34 147.5 108 65.7
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 8.0e-34 147.1 107 62.6
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.0e-33 146.7 107 63.6
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.0e-33 146.7 112 62.5
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.4e-33 146.4 107 60.7
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.8e-33 146.0 112 65.2
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 4.0e-33 144.8 104 63.5
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.2e-33 144.4 107 62.6
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 5.2e-33 144.4 107 60.7
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 5.2e-33 144.4 112 62.5
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 6.8e-33 144.1 107 60.7
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-32 143.3 107 61.7
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.2e-32 143.3 107 61.7
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 7.5e-32 140.6 106 63.2
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 7.5e-32 140.6 107 62.6
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 1.7e-31 139.4 112 59.8
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 2.8e-31 138.7 107 57.9
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 3.7e-31 138.3 107 59.8
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 8.3e-31 137.1 107 57.9
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.1e-30 136.7 107 55.1
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.4e-30 136.3 107 58.9
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.4e-30 136.3 107 58.9
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 1.4e-30 136.3 107 60.7
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 2.4e-30 135.6 107 58.9
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 3.1e-30 135.2 106 61.3
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 3.1e-30 135.2 107 57.0
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 9.2e-30 133.7 107 56.1
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 9.2e-30 133.7 108 59.3
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.6e-29 132.9 107 58.9
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.0e-29 132.5 107 56.1
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.7e-29 132.1 106 61.3
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.7e-29 132.1 110 54.5
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 2.7e-29 132.1 108 55.6
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.5e-29 131.7 107 60.7
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.5e-29 131.7 107 60.7
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 4.5e-29 131.3 107 60.7
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 5.9e-29 131.0 112 55.4
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 5.9e-29 131.0 112 55.4
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.0e-28 130.2 107 57.9
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.0e-28 130.2 99 62.6
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 1.3e-28 129.8 113 56.6
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.3e-28 129.8 107 57.0
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 1.3e-28 129.8 110 54.5
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.7e-28 129.4 107 57.9
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.5e-27 126.3 107 57.9
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.5e-27 126.3 108 57.4
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.9e-27 125.9 106 59.4
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.9e-27 125.9 107 54.2
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.5e-27 125.6 106 58.5
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 5.6e-27 124.4 108 58.3
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 7.3e-27 124.0 107 55.1
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 7.3e-27 124.0 107 57.0
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 7.3e-27 124.0 107 57.9
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 9.5e-27 123.6 107 56.1
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 9.5e-27 123.6 107 53.3
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.6e-26 122.9 107 54.2
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.6e-26 122.9 107 54.2
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.1e-26 122.5 111 52.3
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.8e-26 122.1 106 54.7
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 2.8e-26 122.1 110 56.4
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 2.8e-26 122.1 106 57.5
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 2.8e-26 122.1 106 59.4
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 4.7e-26 121.3 109 54.1
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 4.7e-26 121.3 109 54.1
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 4.7e-26 121.3 106 58.5
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 8.0e-26 120.6 107 54.2
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 8.0e-26 120.6 106 55.7
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.0e-25 120.2 109 53.2
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.0e-25 120.2 109 53.2
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.4e-25 119.8 107 52.3
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.8e-25 119.4 107 51.4
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 2.3e-25 119.0 109 52.3
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 2.3e-25 119.0 85 65.9
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.3e-25 119.0 107 55.1
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 8.9e-25 117.1 106 55.7
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.5e-24 116.3 103 56.3
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.4e-24 114.8 99 58.6
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 3.7e-23 111.7 107 51.4
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.1e-22 110.2 108 55.6
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.1e-22 110.2 106 50.9
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.2e-22 108.6 105 53.3
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 5.4e-22 107.8 107 51.4
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-20 103.2 117 47.9
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.3e-20 103.2 70 70.0
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 6.6e-20 100.9 107 44.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.6e-18 96.3 65 70.8
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.6e-18 96.3 65 70.8
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.1e-17 93.6 65 67.7
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.1e-17 93.6 107 46.7
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.8e-17 92.8 67 65.7
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 4.4e-16 88.2 108 42.6
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.7e-15 86.3 105 43.8
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 9.2e-14 80.5 109 37.6
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 2.0e-08 62.8 67 44.8
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 1.1e-06 57.0 38 71.1


User provided reference genes

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