Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 6.2e-126 454.1 230 100.0
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 2.3e-88 329.3 181 91.2
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 4.2e-66 255.4 140 90.7
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 2.3e-56 223.0 150 76.7
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 6.0e-44 181.8 141 66.7
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.5e-42 177.2 142 70.4
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 9.5e-42 174.5 140 65.0
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 4.7e-41 172.2 142 66.2
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.2e-41 171.8 140 60.7
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 5.2e-40 168.7 140 65.0
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 8.9e-40 167.9 141 64.5
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.5e-39 167.2 142 63.4
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 2.0e-39 166.8 163 57.7
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 3.4e-39 166.0 141 62.4
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 5.8e-39 165.2 141 62.4
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 5.8e-39 165.2 142 61.3
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 5.8e-39 165.2 140 62.1
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 7.5e-39 164.9 141 62.4
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.3e-38 164.1 141 61.0
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 3.2e-37 159.5 141 58.2
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 3.2e-37 159.5 144 59.0
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.6e-36 157.1 141 61.7
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 7.8e-36 154.8 140 61.4
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 1.3e-35 154.1 140 57.9
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 1.7e-35 153.7 140 58.6
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 2.3e-35 153.3 145 60.0
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 2.3e-35 153.3 142 59.9
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.3e-35 153.3 142 59.9
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 8.6e-35 151.4 142 59.2
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.5e-34 149.8 141 58.2
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 2.5e-34 149.8 145 60.0
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 3.3e-34 149.4 141 62.4
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 3.3e-34 149.4 150 58.0
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 7.3e-34 148.3 144 58.3
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 1.2e-33 147.5 140 55.7
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 1.6e-33 147.1 145 58.6
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 2.8e-33 146.4 140 55.7
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 4.7e-33 145.6 143 58.7
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 6.2e-33 145.2 143 58.7
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 8.1e-33 144.8 143 60.1
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 8.1e-33 144.8 145 56.6
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 1.4e-32 144.1 140 58.6
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 3.1e-32 142.9 143 60.1
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 5.2e-32 142.1 153 55.6
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.2e-32 142.1 140 56.4
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 6.8e-32 141.7 142 57.7
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 1.2e-31 141.0 144 53.5
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 1.2e-31 141.0 144 53.5
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 1.5e-31 140.6 143 56.6
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 2.0e-31 140.2 141 57.4
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 2.6e-31 139.8 143 55.9
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 7.6e-31 138.3 140 54.3
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 1.3e-30 137.5 144 57.6
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 2.9e-30 136.3 143 57.3
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 4.9e-30 135.6 143 57.3
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 4.9e-30 135.6 143 57.3
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 4.9e-30 135.6 144 56.9
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 1.1e-29 134.4 143 56.6
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 2.4e-29 133.3 142 54.9
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 3.2e-29 132.9 160 52.5
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 4.2e-29 132.5 90 73.3
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 5.4e-29 132.1 144 55.6
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 5.4e-29 132.1 143 55.9
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 5.4e-29 132.1 124 58.1
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 7.1e-29 131.7 140 54.3
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 9.2e-29 131.3 144 57.6
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 9.2e-29 131.3 153 49.7
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 9.2e-29 131.3 143 56.6
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 1.2e-28 131.0 124 54.8
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 1.6e-28 130.6 147 55.8
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.6e-28 130.6 126 52.4
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 2.1e-28 130.2 144 54.2
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 2.1e-28 130.2 142 55.6
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 2.7e-28 129.8 147 50.3
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 6.0e-28 128.6 153 54.2
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 7.8e-28 128.3 144 49.3
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 1.7e-27 127.1 145 54.5
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 1.7e-27 127.1 141 51.1
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 1.7e-27 127.1 163 49.1
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 3.0e-27 126.3 146 54.1
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 3.9e-27 125.9 143 53.8
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 8.7e-27 124.8 155 50.3
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 8.7e-27 124.8 148 47.3
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 1.1e-26 124.4 100 65.0
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.9e-26 123.6 146 47.9
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 1.9e-26 123.6 146 54.8
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 4.3e-26 122.5 139 52.5
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 4.3e-26 122.5 145 53.8
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 5.6e-26 122.1 149 51.7
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 7.3e-26 121.7 153 49.0
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 2.1e-25 120.2 82 70.7
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.1e-24 117.9 152 46.1
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.1e-24 117.9 137 48.2
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 3.1e-24 116.3 150 48.7
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 9.0e-24 114.8 153 47.7
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 2.2e-22 110.2 132 47.7
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 4.9e-22 109.0 157 43.9
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 1.1e-21 107.8 134 47.0
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 5.4e-21 105.5 145 46.9
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 3.5e-20 102.8 162 42.0
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.3e-19 100.9 126 48.4
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 6.6e-19 98.6 120 47.5
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 8.7e-19 98.2 148 43.9
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 7.3e-18 95.1 130 45.4
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 1.3e-17 94.4 126 48.4
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 1.6e-17 94.0 73 64.4
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 4.8e-17 92.4 60 70.0
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 7.6e-15 85.1 76 56.6
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 6.4e-14 82.0 117 41.9
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 8.4e-14 81.6 93 48.4
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 2.4e-13 80.1 91 47.3
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 2.4e-13 80.1 93 50.5
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 9.3e-13 78.2 126 43.7
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 1.8e-11 73.9 166 37.3
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.3e-09 67.8 126 37.3
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 1.6e-09 67.4 92 40.2
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 8.1e-09 65.1 91 41.8
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 1.1e-08 64.7 57 68.4
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 5.3e-08 62.4 93 44.1
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 6.9e-08 62.0 60 55.0
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 9.0e-08 61.6 49 63.3
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 2.6e-07 60.1 149 32.2
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 1.0e-06 58.2 103 38.8
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 2.9e-06 56.6 45 57.8


User provided reference genes

Program Settings