Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.3e-124 449.9 245 100.0
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 8.7e-102 374.0 249 84.7
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 1.2e-98 363.6 249 83.5
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 4.5e-90 335.1 258 76.7
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 1.4e-43 180.6 257 47.9
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 7.0e-43 178.3 264 52.3
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 2.0e-42 176.8 263 50.6
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.5e-42 176.0 262 51.5
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.1e-40 171.0 264 50.8
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 3.3e-40 169.5 248 49.2
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 7.3e-40 168.3 190 56.8
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 1.6e-39 167.2 262 45.8
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 2.8e-39 166.4 243 49.4
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.1e-38 164.5 257 47.9
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.4e-38 164.1 195 51.3
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 6.8e-38 161.8 183 58.5
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 5.8e-37 158.7 244 50.0
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 9.8e-37 157.9 254 43.7
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.3e-36 157.5 221 48.9
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 2.9e-36 156.4 79 100.0
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 2.9e-36 156.4 171 55.0
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 3.7e-36 156.0 231 47.2
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 3.7e-36 156.0 222 48.2
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 1.1e-35 154.5 197 53.8
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.9e-35 153.7 255 43.5
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.9e-35 153.7 226 46.5
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 5.4e-35 152.1 183 51.4
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 7.0e-35 151.8 199 52.8
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 9.2e-35 151.4 121 65.3
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 9.2e-35 151.4 191 50.3
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 4.6e-34 149.1 188 48.9
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 6.0e-34 148.7 239 43.9
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 6.0e-34 148.7 245 44.1
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 3.9e-33 146.0 258 46.9
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 6.6e-33 145.2 240 42.9
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 6.6e-33 145.2 169 58.6
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 8.6e-33 144.8 176 55.1
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.9e-32 143.7 246 47.2
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 1.9e-32 143.7 265 43.8
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 1.9e-32 143.7 259 45.2
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 4.3e-32 142.5 273 40.3
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 4.3e-32 142.5 191 51.8
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 9.5e-32 141.4 267 41.6
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 2.1e-31 140.2 236 41.9
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 2.8e-31 139.8 246 46.7
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 2.8e-31 139.8 259 44.4
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 2.3e-30 136.7 211 41.7
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 4.0e-30 136.0 254 44.9
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 6.8e-30 135.2 196 49.0
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 8.9e-30 134.8 245 44.9
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.5e-29 134.0 158 52.5
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 2.0e-29 133.7 188 49.5
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 3.4e-29 132.9 229 45.9
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 3.4e-29 132.9 215 44.2
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 3.4e-29 132.9 231 43.7
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 5.8e-29 132.1 211 46.4
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 7.5e-29 131.7 145 52.4
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 1.3e-28 131.0 249 43.4
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.7e-28 130.6 211 44.1
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 1.7e-28 130.6 211 44.1
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 2.9e-28 129.8 184 47.8
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 2.9e-28 129.8 261 42.5
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 6.4e-28 128.6 149 52.3
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 6.4e-28 128.6 247 38.9
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.1e-27 127.9 236 42.4
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 1.4e-27 127.5 216 42.6
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.4e-27 127.5 188 46.8
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 2.4e-27 126.7 234 46.2
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.2e-26 124.4 215 42.8
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 1.2e-26 124.4 211 43.1
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.2e-26 124.4 192 45.3
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 1.6e-26 124.0 199 46.7
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 4.6e-26 122.5 219 42.9
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 4.6e-26 122.5 178 47.2
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 6.0e-26 122.1 191 44.0
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 7.8e-26 121.7 188 50.5
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 1.3e-25 120.9 128 54.7
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 2.3e-25 120.2 211 41.2
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 2.3e-25 120.2 184 44.6
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 2.3e-25 120.2 197 41.6
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 3.0e-25 119.8 184 44.6
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 3.9e-25 119.4 240 41.7
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 6.6e-25 118.6 183 44.8
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.5e-24 117.5 221 39.4
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.9e-24 117.1 188 48.4
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.9e-24 117.1 234 41.5
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 2.5e-24 116.7 178 47.8
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 2.5e-24 116.7 159 47.2
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 4.3e-24 115.9 150 48.7
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 1.2e-23 114.4 142 56.3
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 3.6e-23 112.8 200 43.0
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 1.1e-22 111.3 208 44.2
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.0e-22 109.4 234 41.9
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 5.2e-22 109.0 94 60.6
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 5.2e-22 109.0 292 32.2
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 8.9e-22 108.2 140 55.7
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.6e-21 106.7 145 52.4
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 8.4e-20 101.7 267 36.7
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 8.4e-20 101.7 164 49.4
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 3.2e-19 99.8 192 41.7
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 1.2e-18 97.8 130 53.1
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 4.6e-18 95.9 198 43.9
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 7.8e-18 95.1 94 67.0
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.0e-17 94.7 247 38.5
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 1.3e-17 94.4 190 42.6
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 6.6e-17 92.0 291 35.7
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.5e-16 90.9 156 43.6
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 1.5e-16 90.9 245 31.4
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 2.5e-16 90.1 123 48.0
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 3.3e-16 89.7 125 43.2
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 1.2e-13 81.3 194 35.1
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 7.6e-13 78.6 117 47.9
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.1e-11 74.7 112 40.2
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 6.0e-10 68.9 34 94.1
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.0e-09 68.2 93 45.2
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 3.0e-09 66.6 99 41.4
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 8.7e-09 65.1 91 46.2
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 3.3e-08 63.2 51 58.8
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 4.8e-07 59.3 43 60.5
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 6.2e-07 58.9 65 43.1
Ah.05g171290 Amaranthus hybridus HOM05D005915 ORTHO05D007239 3.1e-06 56.6 106 40.6


User provided reference genes

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