Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 7.0e-262 906.7 460 100.0
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 7.1e-246 853.6 461 94.8
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 1.1e-235 819.7 461 92.0
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 5.1e-228 794.3 461 87.6
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 4.9e-207 724.5 459 81.0
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 5.1e-204 714.5 460 79.6
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 8.7e-204 713.8 448 81.0
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 3.3e-203 711.8 464 78.0
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 4.8e-202 708.0 448 80.4
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 6.9e-201 704.1 462 77.9
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 5.9e-200 701.0 460 77.4
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 7.6e-200 700.7 459 79.5
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 1.0e-199 700.3 459 77.6
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 1.3e-199 699.9 459 77.6
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 4.2e-198 694.9 465 77.4
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 4.2e-198 694.9 462 78.1
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 9.3e-198 693.7 460 77.6
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 1.6e-197 693.0 413 83.8
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 7.9e-197 690.6 434 80.6
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 5.1e-196 688.0 474 75.7
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 6.7e-196 687.6 440 80.7
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 8.7e-196 687.2 428 82.0
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 1.1e-195 686.8 394 86.3
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 3.3e-195 685.3 442 79.4
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 2.8e-194 682.2 464 75.2
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 3.1e-193 678.7 464 76.7
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 2.0e-192 676.0 466 75.1
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 1.0e-191 673.7 461 75.9
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 1.3e-191 673.3 413 80.6
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 1.7e-191 672.9 479 73.1
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 2.2e-191 672.5 442 77.8
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 5.0e-191 671.4 442 77.6
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 5.0e-191 671.4 440 77.7
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 5.0e-191 671.4 403 83.6
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 6.5e-191 671.0 412 81.1
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 8.5e-191 670.6 442 77.4
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 1.4e-190 669.8 437 78.9
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 1.4e-190 669.8 437 78.5
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 3.2e-190 668.7 459 74.9
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 3.2e-190 668.7 464 74.6
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 4.2e-190 668.3 412 81.1
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 4.2e-190 668.3 418 79.9
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 7.2e-190 667.5 413 80.4
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 1.6e-189 666.4 398 83.7
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 3.6e-189 665.2 411 80.8
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 3.6e-189 665.2 470 72.8
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 6.1e-189 664.5 465 73.5
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 6.1e-189 664.5 444 78.2
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 7.9e-189 664.1 479 72.7
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 7.9e-189 664.1 395 82.8
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.0e-188 663.7 412 80.1
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 1.0e-188 663.7 464 73.3
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 1.4e-188 663.3 464 73.9
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 1.8e-188 662.9 455 74.5
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 3.0e-188 662.1 411 80.3
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 3.9e-188 661.8 411 80.3
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 3.9e-188 661.8 454 74.9
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 3.9e-188 661.8 387 84.8
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 6.7e-188 661.0 454 74.9
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 6.7e-188 661.0 411 80.0
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 6.7e-188 661.0 413 79.9
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 6.7e-188 661.0 445 78.0
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 1.5e-187 659.8 472 71.6
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.5e-187 659.8 461 74.0
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 1.5e-187 659.8 450 76.9
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.5e-187 659.8 476 71.0
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 1.5e-187 659.8 459 73.9
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 1.5e-187 659.8 457 74.2
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 2.6e-187 659.1 402 82.3
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 2.6e-187 659.1 438 76.0
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 4.3e-187 658.3 397 84.6
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 7.4e-187 657.5 448 74.6
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 7.4e-187 657.5 451 77.2
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 1.3e-186 656.8 398 81.4
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 1.7e-186 656.4 462 73.8
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.8e-186 655.6 461 73.5
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 2.8e-186 655.6 469 72.5
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 2.8e-186 655.6 442 78.5
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 3.7e-186 655.2 454 74.4
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 3.7e-186 655.2 472 70.3
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 3.7e-186 655.2 400 81.8
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 4.8e-186 654.8 412 79.1
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 4.8e-186 654.8 406 81.0
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 6.3e-186 654.4 465 73.5
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 4.1e-185 651.7 469 71.9
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 9.1e-185 650.6 457 74.2
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 2.0e-184 649.4 397 81.1
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 2.6e-184 649.0 400 82.5
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 3.4e-184 648.7 457 74.0
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 1.0e-183 647.1 438 74.7
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 1.7e-183 646.4 462 69.9
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 1.7e-183 646.4 437 73.9
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 1.7e-183 646.4 401 81.5
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 2.2e-183 646.0 394 81.0
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 2.2e-183 646.0 434 74.9
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 1.1e-182 643.7 392 81.6
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 1.4e-182 643.3 396 81.1
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 1.2e-181 640.2 437 74.1
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 1.6e-181 639.8 442 75.3
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 2.7e-181 639.0 538 65.2
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 2.8e-178 629.0 398 79.4
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 4.1e-177 625.2 476 68.7
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 6.5e-175 617.8 396 77.0
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 2.7e-168 595.9 384 75.3
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 3.2e-166 589.0 425 67.8
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.2e-160 570.5 476 64.5
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 3.4e-155 552.4 368 73.1
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 3.6e-149 532.3 395 67.8
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 1.8e-148 530.0 458 64.0
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 5.7e-147 525.0 477 60.2
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 7.5e-147 524.6 411 67.9
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 2.2e-146 523.1 391 67.3
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 7.8e-144 514.6 318 81.4
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 3.0e-143 512.7 380 68.7
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 1.9e-137 493.4 356 73.6
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 4.6e-136 488.8 386 62.7
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 1.8e-132 476.9 361 65.4
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 6.4e-130 468.4 389 60.4
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.4e-129 466.5 331 72.8
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 3.9e-127 459.1 287 79.4
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 3.9e-127 459.1 377 62.3
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 7.6e-123 444.9 272 82.4
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 9.2e-121 438.0 300 71.7
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 4.4e-115 419.1 361 64.3
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 4.4e-115 419.1 406 57.4
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 2.1e-112 410.2 299 70.9
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 1.9e-110 403.7 263 76.4
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 3.6e-109 399.4 324 67.3
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 1.9e-102 377.1 323 64.7
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 1.3e-98 364.4 211 86.3
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 2.4e-97 360.1 314 64.0
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 5.6e-94 349.0 366 51.1
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 4.0e-92 342.8 342 51.5
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 9.3e-89 331.6 229 75.1
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 4.3e-86 322.8 212 74.1
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 3.1e-84 316.6 213 75.1
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 1.0e-74 285.0 222 67.1
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 2.9e-74 283.5 174 81.0
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 1.0e-66 258.5 191 69.6
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 6.1e-64 249.2 185 69.7
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 2.2e-61 240.7 124 91.9
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 9.1e-60 235.3 136 87.5
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 7.7e-59 232.3 382 37.7
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 9.7e-54 215.3 305 41.6
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 1.1e-49 201.8 134 76.1
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 1.5e-41 174.9 115 80.9
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 3.1e-36 157.1 112 75.9
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 3.1e-36 157.1 84 89.3
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 7.0e-36 156.0 112 74.1
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 1.3e-34 151.8 124 64.5
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 7.0e-28 129.4 77 85.7
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 1.4e-23 115.2 86 69.8
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 1.7e-21 108.2 242 33.9
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 2.4e-20 104.4 128 52.3
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 1.3e-18 98.6 60 88.3
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 2.5e-17 94.4 60 85.0
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 3.1e-15 87.4 68 67.6
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 2.6e-14 84.3 50 76.0
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 1.3e-13 82.0 58 60.3
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 3.0e-10 70.9 44 70.5


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