Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.5e-49 199.1 97 100.0
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.4e-47 191.8 96 95.8
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.3e-45 185.3 96 90.6
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.1e-43 178.7 97 85.6
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 3.1e-42 174.9 97 84.5
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 4.4e-41 171.0 101 83.2
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 7.6e-41 170.2 97 83.5
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 7.6e-41 170.2 98 85.7
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.7e-40 169.1 98 83.7
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.7e-40 169.1 98 82.7
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 2.2e-40 168.7 101 80.2
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.2e-40 168.7 101 80.2
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.2e-40 168.7 101 80.2
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 3.8e-40 167.9 95 82.1
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 4.9e-40 167.5 98 84.7
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 6.4e-40 167.2 97 82.5
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 8.4e-40 166.8 95 84.2
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 8.4e-40 166.8 98 83.7
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.9e-39 165.6 101 79.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.4e-39 165.2 96 83.3
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 3.2e-39 164.9 97 76.3
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 3.2e-39 164.9 97 78.4
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 4.2e-39 164.5 96 83.3
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 5.4e-39 164.1 98 80.6
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 9.3e-39 163.3 101 79.2
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.7e-38 161.8 96 84.4
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.7e-38 161.8 96 84.4
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.7e-38 161.8 96 84.4
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 2.7e-38 161.8 98 80.6
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 3.5e-38 161.4 97 78.4
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 6.0e-38 160.6 99 78.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 7.8e-38 160.2 96 79.2
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 3.0e-37 158.3 96 76.0
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 3.0e-37 158.3 97 80.4
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 3.0e-37 158.3 96 79.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 3.9e-37 157.9 91 81.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 3.9e-37 157.9 98 77.6
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 5.1e-37 157.5 98 75.5
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 6.6e-37 157.1 97 75.3
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 6.6e-37 157.1 98 77.6
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 1.1e-36 156.4 95 77.9
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 75.5
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 75.5
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 76.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.5e-36 156.0 91 80.2
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 76.5
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 76.5
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.5e-36 155.2 89 78.7
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.5e-36 155.2 96 77.1
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 74.2
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 3.3e-36 154.8 86 84.9
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 3.3e-36 154.8 93 77.4
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 3.3e-36 154.8 94 77.7
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 4.3e-36 154.5 97 74.2
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 7.3e-36 153.7 103 72.8
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.6e-35 152.5 97 75.3
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.6e-35 152.5 97 72.2
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.1e-35 152.1 97 73.2
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 3.6e-35 151.4 95 76.8
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 3.6e-35 151.4 101 73.3
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 4.8e-35 151.0 93 76.3
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 73.2
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 73.2
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 73.2
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 73.2
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 6.2e-35 150.6 98 75.5
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 6.2e-35 150.6 92 76.1
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 72.2
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.8e-34 149.1 98 70.4
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.8e-34 149.1 90 75.6
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 1.8e-34 149.1 95 75.8
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 74.2
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 3.1e-34 148.3 96 75.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 4.0e-34 147.9 95 71.6
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 5.3e-34 147.5 98 72.4
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 1.2e-33 146.4 125 63.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.6e-33 145.2 94 71.3
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 3.4e-33 144.8 98 71.4
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 3.4e-33 144.8 90 72.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.4e-33 144.8 90 74.4
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 4.5e-33 144.4 96 71.9
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 4.5e-33 144.4 98 70.4
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 4.5e-33 144.4 95 72.6
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 4.5e-33 144.4 97 68.0
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 5.8e-33 144.1 98 71.4
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 5.8e-33 144.1 98 70.4
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 5.8e-33 144.1 98 71.4
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.7e-32 142.5 89 73.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 2.2e-32 142.1 98 69.4
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 4.9e-32 141.0 104 68.3
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 6.4e-32 140.6 99 71.7
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 6.4e-32 140.6 98 71.4
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 6.4e-32 140.6 79 79.7
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.9e-31 139.0 79 81.0
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 3.2e-31 138.3 94 67.0
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 1.6e-30 136.0 79 78.5
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 3.5e-30 134.8 87 73.6
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.0e-29 133.3 80 81.2
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.0e-29 133.3 97 66.0
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 3.0e-29 131.7 83 71.1
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 6.7e-29 130.6 80 81.2
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 3.3e-28 128.3 82 67.1
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 9.6e-28 126.7 62 96.8
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.1e-26 123.2 104 64.4
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 6.9e-26 120.6 78 70.5
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.7e-24 115.9 81 67.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.6e-22 109.4 88 62.5
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.1e-20 103.2 71 64.8
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.3e-19 99.8 78 59.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 3.1e-18 95.1 88 53.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 9.0e-18 93.6 89 51.7
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.5e-15 85.5 115 46.1
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 3.9e-13 78.2 78 55.1
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 7.4e-12 73.9 60 60.0
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.8e-11 72.0 43 74.4
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 3.7e-11 71.6 62 58.1
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.7e-08 62.8 38 68.4
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 8.5e-08 60.5 36 80.6
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 1.4e-07 59.7 53 50.9


User provided reference genes

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