Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G008300 Citrullus lanatus HOM05D000240 ORTHO05D149561 3.1e-66 255.0 128 100.0
MELO3C016369.2 Cucumis melo HOM05D000240 ORTHO05D001140 1.8e-10 69.7 42 88.1
CsaV3_4G005820 Cucumis sativus L. HOM05D000240 ORTHO05D001140 3.1e-10 68.9 42 88.1
Sed0007011 Sechium edule HOM05D000240 ORTHO05D001140 7.7e-09 64.3 42 83.3
Sed0004522 Sechium edule HOM05D000240 ORTHO05D001140 2.2e-08 62.8 42 76.2
Ca_24902_v3 Cicer arietinum L. HOM05D000240 ORTHO05D001140 3.8e-08 62.0 42 71.4
Haze_03801 Corylus avellana HOM05D000240 ORTHO05D001140 1.1e-07 60.5 42 73.8
arahy.Tifrunner.gnm1.ann1.721SP0 Arachis hypogaea HOM05D000240 ORTHO05D001140 1.9e-07 59.7 42 69.0
CiPaw.07G056700 Carya illinoinensis HOM05D000240 ORTHO05D001140 5.5e-07 58.2 42 73.8
CiPaw.08G133700 Carya illinoinensis HOM05D000240 ORTHO05D001140 7.2e-07 57.8 42 73.8
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 7.2e-07 57.8 45 68.9
Glyma.01G168200 Glycine max HOM05D000240 ORTHO05D001140 7.2e-07 57.8 42 73.8
TWI53G1266 Tripterygium wilfordii HOM05D000240 ORTHO05D001140 7.2e-07 57.8 42 73.8
Cfa006951 Carpinus fangiana HOM05D000240 ORTHO05D001140 9.4e-07 57.4 42 69.0
Lsat_1_v5_gn_8_127960 Lactuca sativa HOM05D000240 ORTHO05D001140 9.4e-07 57.4 44 68.2
Potri.002G027600 Populus trichocarpa HOM05D000240 ORTHO05D001140 9.4e-07 57.4 37 73.0
Medtr5g021650 Medicago truncatula HOM05D000240 ORTHO05D001140 1.2e-06 57.0 42 64.3
Phvul.002G111200 Phaseolus vulgaris HOM05D000240 ORTHO05D001140 1.2e-06 57.0 42 71.4
QL06p033858 Quercus lobata HOM05D000240 ORTHO05D001140 1.2e-06 57.0 42 73.8
VMungo1215G2142 Vigna mungo HOM05D000240 ORTHO05D001140 1.2e-06 57.0 42 71.4
Atru.chr3.774 Acer truncatum HOM05D000240 ORTHO05D001140 2.1e-06 56.2 39 71.8
arahy.Tifrunner.gnm1.ann1.K48ZDK Arachis hypogaea HOM05D000240 ORTHO05D001140 2.7e-06 55.8 42 69.0
HanXRQChr06g0174901 Helianthus annuus HOM05D000240 ORTHO05D001140 2.7e-06 55.8 47 63.8
TPR.G2343 Trifolium pratense HOM05D000240 ORTHO05D001140 3.6e-06 55.5 42 64.3
Lj2g0001012 Lotus japonicus HOM05D000240 ORTHO05D001140 4.7e-06 55.1 42 66.7
Sc03g0003510 Simmondsia chinensis HOM05D000240 ORTHO05D001140 4.7e-06 55.1 40 67.5
PGSC0003DMG400003550 Solanum tuberosum HOM05D000240 ORTHO05D001140 4.7e-06 55.1 42 64.3
TWI09G1077 Tripterygium wilfordii HOM05D000240 ORTHO05D001140 4.7e-06 55.1 42 71.4
CANSAT11G0520 Cannabis sativa HOM05D000240 ORTHO05D001140 6.1e-06 54.7 46 60.9
arahy.Tifrunner.gnm1.ann1.4T0CVS Arachis hypogaea HOM05D000240 ORTHO05D001140 8.0e-06 54.3 42 69.0
arahy.Tifrunner.gnm1.ann1.72AJJX Arachis hypogaea HOM05D000240 ORTHO05D001140 8.0e-06 54.3 42 69.0
CSS0044111 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D001140 8.0e-06 54.3 42 66.7
Manes.02G101900 Manihot esculenta HOM05D000240 ORTHO05D001140 8.0e-06 54.3 42 66.7
Peaxi162Scf00083g01124 Petunia axillaris HOM05D000240 ORTHO05D001140 8.0e-06 54.3 42 59.5
Phvul.011G038800 Phaseolus vulgaris HOM05D000240 ORTHO05D001140 8.0e-06 54.3 46 58.7
Sabra02G0021800 Salix brachista HOM05D000240 ORTHO05D001140 8.0e-06 54.3 37 67.6
VMungo1127G0831 Vigna mungo HOM05D000240 ORTHO05D001140 8.0e-06 54.3 46 58.7


User provided reference genes

Program Settings