Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G007920 Citrullus lanatus HOM05D002197 ORTHO05D150578 1.3e-31 139.0 67 100.0
ClCG09G020570 Citrullus lanatus HOM05D002197 ORTHO05D002462 5.3e-09 63.9 39 74.4
Sed0007231 Sechium edule HOM05D002197 ORTHO05D002462 2.6e-08 61.6 53 58.5
MELO3C002891.2 Cucumis melo HOM05D002197 ORTHO05D002462 5.8e-08 60.5 37 73.0
CsaV3_5G025790 Cucumis sativus L. HOM05D002197 ORTHO05D002462 5.8e-08 60.5 37 73.0
Hund22498 Selenicereus undatus HOM05D002197 ORTHO05D002462 2.9e-07 58.2 35 74.3
Gohir.A05G297500 Gossypium hirsutum HOM05D002197 ORTHO05D002462 3.8e-07 57.8 48 60.4
ATR0829G047 Amborella trichopoda HOM05D002197 ORTHO05D002462 4.9e-07 57.4 36 69.4
Dinv22866 Davidia involucrata HOM05D002197 ORTHO05D002462 1.1e-06 56.2 51 51.0
Duzib114G0733 Durio zibethinus HOM05D002197 ORTHO05D002462 1.1e-06 56.2 35 71.4
Gohir.D05G297400 Gossypium hirsutum HOM05D002197 ORTHO05D002462 1.1e-06 56.2 48 58.3
Gorai.009G314700 Gossypium raimondii HOM05D002197 ORTHO05D002462 1.1e-06 56.2 48 58.3
Phvul.007G092800 Phaseolus vulgaris HOM05D002197 ORTHO05D002462 1.1e-06 56.2 47 57.4
Thecc.10G070200 Theobroma cacao HOM05D002197 ORTHO05D002462 1.1e-06 56.2 35 71.4
MBI04_g27280_MAGBIO Magnolia biondii HOM05D002197 ORTHO05D002462 1.4e-06 55.8 35 71.4
Eucgr.J01105 Eucalyptus grandis HOM05D002197 ORTHO05D002462 1.9e-06 55.5 40 67.5
COL.COLO4_23715 Corchorus olitorius HOM05D002197 ORTHO05D002462 2.5e-06 55.1 35 71.4
Gorai.013G026400 Gossypium raimondii HOM05D002197 ORTHO05D002462 2.5e-06 55.1 48 56.2
PGR044G1013 Punica granatum HOM05D002197 ORTHO05D002462 2.5e-06 55.1 35 71.4
Cpa.g.sc466.8 Carica papaya HOM05D002197 ORTHO05D002462 3.2e-06 54.7 36 66.7
Sed0021581 Sechium edule HOM05D002197 ORTHO05D002462 3.2e-06 54.7 36 66.7
Manes.10G044300 Manihot esculenta HOM05D002197 ORTHO05D002462 4.2e-06 54.3 46 54.3
Nn1g02072 Nelumbo nucifera HOM05D002197 ORTHO05D002462 4.2e-06 54.3 35 68.6
TAR623G0770 Trochodendron aralioides HOM05D002197 ORTHO05D002462 4.2e-06 54.3 35 68.6
VMungo0720G0801 Vigna mungo HOM05D002197 ORTHO05D002462 4.2e-06 54.3 47 55.3
Nn3g19249 Nelumbo nucifera HOM05D002197 ORTHO05D002462 7.1e-06 53.5 35 68.6
QL08p056571 Quercus lobata HOM05D002197 ORTHO05D002462 7.1e-06 53.5 35 68.6
GSVIVG01022783001 Vitis vinifera HOM05D002197 ORTHO05D002462 7.1e-06 53.5 35 65.7
CSS0029135 Camellia sinensis var. sinensis HOM05D002197 ORTHO05D002462 9.3e-06 53.1 47 48.9
CSS0030361 Camellia sinensis var. sinensis HOM05D002197 ORTHO05D002462 9.3e-06 53.1 40 62.5
Haze_16920 Corylus avellana HOM05D002197 ORTHO05D002462 9.3e-06 53.1 35 68.6
CsaV3_3G001080 Cucumis sativus L. HOM05D002197 ORTHO05D002462 9.3e-06 53.1 35 65.7
Sed0009442 Sechium edule HOM05D002197 ORTHO05D002462 9.3e-06 53.1 35 65.7


User provided reference genes

Program Settings