Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 0.0e+00 1325.1 681 100.0
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 0.0e+00 1163.3 689 89.0
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 0.0e+00 1117.4 688 86.3
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 3.7e-291 1004.6 676 79.6
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 1.5e-220 770.0 683 65.3
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 2.2e-147 526.9 683 49.2
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 4.0e-144 516.2 709 47.4
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 2.2e-139 500.4 692 46.1
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 7.0e-133 478.8 568 50.5
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 5.0e-131 472.6 700 44.7
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 4.2e-130 469.5 684 43.9
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 1.0e-128 464.9 692 45.1
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.0e-128 464.9 694 44.5
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 3.0e-128 463.4 695 44.7
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 4.0e-128 463.0 688 46.2
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 5.2e-128 462.6 704 43.6
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.7e-126 457.6 692 43.8
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 2.4e-125 453.8 701 43.2
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 8.6e-123 445.3 608 45.4
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 1.1e-122 444.9 691 43.0
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 8.9e-120 435.3 686 43.9
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.7e-119 432.6 567 48.0
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.7e-118 431.0 637 44.3
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 1.1e-117 428.3 692 41.9
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.0e-115 421.8 684 42.5
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 2.3e-115 420.6 686 42.3
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.6e-115 418.7 607 44.8
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.3e-114 416.4 715 41.3
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 4.3e-114 416.4 695 42.0
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.2e-113 414.8 666 41.9
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.2e-113 412.5 717 40.6
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-112 411.4 694 42.1
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 5.2e-112 409.5 549 45.5
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 1.5e-111 407.9 678 43.7
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 4.4e-111 406.4 692 41.3
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.4e-111 406.4 718 40.8
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 7.5e-111 405.6 701 40.9
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.7e-110 404.4 717 40.3
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.2e-110 404.1 701 40.9
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 4.6e-108 396.4 686 41.3
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 3.0e-107 393.7 649 43.5
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 3.3e-106 390.2 586 43.7
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.2e-105 388.3 606 44.4
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.2e-105 388.3 706 40.4
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 6.2e-105 386.0 605 42.8
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 5.2e-104 382.9 707 40.5
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.3e-102 378.3 683 39.2
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 3.7e-102 376.7 577 44.0
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 4.9e-102 376.3 689 39.9
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 6.4e-102 375.9 585 44.3
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.9e-101 374.4 577 43.8
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.4e-101 374.0 577 43.8
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 3.2e-101 373.6 690 40.3
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.2e-100 371.7 710 40.4
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 6.0e-100 369.4 693 38.5
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 3.0e-99 367.1 627 41.5
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 7.6e-95 352.4 673 40.3
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 7.6e-95 352.4 703 37.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 7.6e-95 352.4 725 38.1
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 7.1e-93 345.9 706 37.1
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 7.8e-92 342.4 587 41.9
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.2e-87 328.6 780 34.2
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 4.4e-87 326.6 707 37.5
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 7.6e-87 325.9 711 36.7
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.2e-85 320.5 611 36.8
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.0e-83 313.9 608 37.8
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 2.5e-82 310.8 624 37.0
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 3.3e-82 310.5 691 35.0
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 3.6e-81 307.0 446 44.8
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 6.2e-81 306.2 710 37.5
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 9.0e-80 302.4 630 38.1
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 7.6e-79 299.3 697 34.6
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 3.8e-78 297.0 663 35.6
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 7.1e-77 292.7 539 37.7
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.3e-73 282.0 623 37.7
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 3.7e-73 280.4 574 38.2
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.5e-71 273.5 747 32.1
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.5e-71 273.5 445 39.8
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 7.6e-71 272.7 639 35.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.4e-70 269.6 447 41.4
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.0e-67 262.3 593 37.1
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 3.3e-66 257.3 581 36.8
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 2.8e-65 254.2 597 36.3
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 3.7e-65 253.8 634 35.3
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 8.2e-65 252.7 633 35.2
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 5.3e-64 250.0 591 35.5
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 5.3e-64 250.0 530 36.2
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 2.0e-63 248.1 641 35.4
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 2.2e-62 244.6 552 38.6
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 4.9e-62 243.4 631 35.2
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 8.4e-62 242.7 631 35.2
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 1.1e-61 242.3 609 33.8
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 1.4e-61 241.9 577 36.0
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 2.5e-61 241.1 628 35.0
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 4.2e-61 240.4 628 34.9
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 1.2e-60 238.8 628 34.9
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.6e-60 238.4 576 34.9
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 2.1e-60 238.0 580 35.7
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 4.3e-58 230.3 592 35.0
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 6.3e-57 226.5 605 34.5
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 6.3e-57 226.5 566 37.1
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 8.2e-57 226.1 661 33.4
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.0e-55 221.5 697 32.3
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 5.0e-54 216.9 697 32.9
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 6.5e-54 216.5 565 33.8
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.4e-53 215.3 565 35.6
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 3.2e-53 214.2 543 35.5
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 2.1e-52 211.5 584 34.6
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 1.5e-42 178.7 402 36.3
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 7.4e-42 176.4 616 28.7
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.8e-41 174.5 616 28.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.8e-41 173.7 240 47.5
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.0e-27 129.4 249 38.2
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 5.2e-27 127.1 436 27.5
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 2.6e-26 124.8 248 35.5
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 9.7e-26 122.9 551 26.0
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 3.1e-24 117.9 183 42.6
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 7.0e-24 116.7 283 33.9
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 5.2e-11 73.9 73 50.7
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 9.8e-10 69.7 511 25.2
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 9.8e-10 69.7 322 26.4
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.1e-08 66.2 174 29.9
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.5e-07 61.2 293 27.3


User provided reference genes

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