Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.0e-54 214.9 110 100.0
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.2e-37 159.8 110 78.2
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 7.3e-16 87.4 109 49.5
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 3.6e-15 85.1 111 45.0
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.8e-14 82.8 95 53.7
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 4.0e-14 81.6 117 49.6
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.5e-13 79.7 73 56.2
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 3.4e-13 78.6 96 47.9
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 3.4e-13 78.6 96 47.9
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 3.4e-13 78.6 91 48.4
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.4e-13 78.6 112 45.5
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 4.4e-13 78.2 95 50.5
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.4e-13 78.2 95 50.5
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.4e-13 78.2 95 50.5
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.9e-13 77.0 106 47.2
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.3e-12 76.6 106 47.2
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 2.2e-12 75.9 96 49.0
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.8e-12 75.1 125 44.8
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 8.4e-12 73.9 122 45.1
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 8.4e-12 73.9 88 47.7
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.1e-11 73.6 92 45.7
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 3.2e-11 72.0 110 41.8
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 4.2e-11 71.6 63 58.7
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 4.2e-11 71.6 104 48.1
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 4.2e-11 71.6 110 44.5
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 9.3e-11 70.5 87 51.7
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 9.3e-11 70.5 76 50.0
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.2e-10 70.1 91 45.1
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 2.1e-10 69.3 91 40.7
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 2.1e-10 69.3 67 55.2
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.1e-10 69.3 101 45.5
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.7e-10 68.9 94 44.7
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 4.6e-10 68.2 95 44.2
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 4.6e-10 68.2 96 40.6
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 4.6e-10 68.2 68 52.9
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 6.0e-10 67.8 88 47.7
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.0e-10 67.8 58 58.6
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 7.8e-10 67.4 91 49.5
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 7.8e-10 67.4 96 47.9
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.7e-09 66.2 97 43.3
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 2.3e-09 65.9 82 47.6
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 3.0e-09 65.5 60 60.0
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 3.0e-09 65.5 54 59.3
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 3.9e-09 65.1 96 39.6
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 3.9e-09 65.1 98 40.8
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 6.6e-09 64.3 96 39.6
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 6.6e-09 64.3 79 44.3
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 6.6e-09 64.3 99 44.4
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 8.7e-09 63.9 106 42.5
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.5e-08 63.2 61 52.5
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.9e-08 62.8 79 45.6
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.9e-08 62.8 70 51.4
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 2.5e-08 62.4 79 43.0
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 2.5e-08 62.4 89 43.8
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 3.3e-08 62.0 127 40.2
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 3.3e-08 62.0 109 37.6
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 4.3e-08 61.6 61 50.8
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 4.3e-08 61.6 53 50.9
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 4.3e-08 61.6 109 36.7
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 4.3e-08 61.6 91 45.1
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 5.6e-08 61.2 54 50.0
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 5.6e-08 61.2 54 55.6
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 5.6e-08 61.2 62 51.6
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 9.6e-08 60.5 94 42.6
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 1.6e-07 59.7 104 40.4
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.6e-07 59.7 85 41.2
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 1.6e-07 59.7 106 44.3
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.6e-07 59.7 91 39.6
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 1.6e-07 59.7 70 44.3
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 3.6e-07 58.5 56 50.0
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.6e-07 58.5 116 36.2
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 6.2e-07 57.8 93 39.8
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 8.1e-07 57.4 97 39.2
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 1.1e-06 57.0 99 42.4
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 1.1e-06 57.0 99 42.4
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 1.1e-06 57.0 99 42.4
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.1e-06 57.0 92 37.0
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 1.4e-06 56.6 71 45.1
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.8e-06 56.2 98 36.7
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.8e-06 56.2 105 36.2
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 2.4e-06 55.8 101 39.6
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 3.1e-06 55.5 91 39.6
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.1e-06 55.5 69 43.5
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 3.1e-06 55.5 99 37.4
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 5.3e-06 54.7 55 45.5
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 5.3e-06 54.7 92 37.0
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 6.9e-06 54.3 81 44.4


User provided reference genes

Program Settings