Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 2.6e-62 241.9 123 100.0
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 7.1e-52 207.2 110 95.5
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 7.8e-51 203.8 110 94.5
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 1.0e-50 203.4 110 92.7
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.5e-41 172.9 94 94.7
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 7.4e-41 170.6 110 73.6
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 9.0e-39 163.7 107 70.1
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 3.4e-38 161.8 111 69.4
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 4.5e-38 161.4 110 70.0
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 4.5e-38 161.4 112 68.8
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 5.8e-38 161.0 110 70.0
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 5.8e-38 161.0 110 69.1
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 9.9e-38 160.2 110 68.2
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 1.3e-37 159.8 101 72.3
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 1.7e-37 159.5 110 70.0
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 1.7e-37 159.5 110 68.2
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 2.2e-37 159.1 110 70.0
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 2.2e-37 159.1 111 67.6
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.2e-37 159.1 110 70.0
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.2e-37 159.1 110 70.0
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 2.2e-37 159.1 110 69.1
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 2.2e-37 159.1 110 65.5
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 3.8e-37 158.3 111 68.5
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 3.8e-37 158.3 109 67.0
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 4.9e-37 157.9 110 66.4
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 4.9e-37 157.9 107 69.2
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 6.4e-37 157.5 96 79.2
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 8.4e-37 157.1 109 67.9
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 1.1e-36 156.8 109 67.0
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 1.1e-36 156.8 109 67.0
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 1.1e-36 156.8 110 69.1
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 1.4e-36 156.4 109 66.1
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 1.4e-36 156.4 109 66.1
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 1.4e-36 156.4 110 68.2
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 1.4e-36 156.4 111 67.6
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 1.4e-36 156.4 110 65.5
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 1.9e-36 156.0 110 64.5
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 1.9e-36 156.0 110 64.5
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 1.9e-36 156.0 110 69.1
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.4e-36 155.6 110 68.2
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 2.4e-36 155.6 110 68.2
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 2.4e-36 155.6 110 68.2
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 2.4e-36 155.6 110 66.4
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 3.2e-36 155.2 110 69.1
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 4.2e-36 154.8 96 76.0
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 4.2e-36 154.8 100 71.0
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 4.2e-36 154.8 110 67.3
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 4.2e-36 154.8 110 66.4
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 4.2e-36 154.8 105 71.4
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 5.5e-36 154.5 110 70.0
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 5.5e-36 154.5 110 70.0
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 5.5e-36 154.5 110 70.0
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 5.5e-36 154.5 110 70.0
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 5.5e-36 154.5 110 66.4
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 5.5e-36 154.5 110 68.2
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 7.1e-36 154.1 110 67.3
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 7.1e-36 154.1 95 76.8
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 1.2e-35 153.3 107 69.2
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 1.2e-35 153.3 110 67.3
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 1.2e-35 153.3 110 66.4
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 1.6e-35 152.9 110 66.4
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 2.1e-35 152.5 110 64.5
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 2.1e-35 152.5 110 65.5
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 2.7e-35 152.1 110 68.2
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 2.7e-35 152.1 110 66.4
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 3.5e-35 151.8 110 66.4
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 4.6e-35 151.4 96 74.0
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 4.6e-35 151.4 110 65.5
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 4.6e-35 151.4 110 67.3
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 6.0e-35 151.0 111 64.9
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 1.0e-34 150.2 100 71.0
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 1.0e-34 150.2 100 69.0
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.3e-34 149.8 110 68.2
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 1.3e-34 149.8 110 62.7
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 3.0e-34 148.7 110 66.4
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 3.9e-34 148.3 96 68.8
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 3.9e-34 148.3 110 61.8
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 6.7e-34 147.5 110 64.5
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 8.7e-34 147.1 107 66.4
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 1.1e-33 146.7 110 61.8
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 2.5e-33 145.6 109 61.5
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 3.3e-33 145.2 91 73.6
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 3.3e-33 145.2 110 66.4
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 4.3e-33 144.8 91 73.6
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 5.6e-33 144.4 99 65.7
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 7.4e-33 144.1 91 75.8
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 9.6e-33 143.7 91 71.4
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 9.6e-33 143.7 116 56.9
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 1.3e-32 143.3 98 66.3
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 4.8e-32 141.4 93 65.6
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 8.2e-32 140.6 110 61.8
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 8.2e-32 140.6 96 65.6
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 1.1e-31 140.2 91 71.4
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 1.4e-31 139.8 117 59.8
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 1.4e-31 139.8 104 60.6
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 1.8e-31 139.4 97 62.9
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 2.4e-31 139.0 112 60.7
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 3.1e-31 138.7 97 68.0
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 4.0e-31 138.3 103 61.2
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 5.3e-31 137.9 97 68.0
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 5.8e-30 134.4 93 62.4
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 7.6e-30 134.0 103 62.1
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 2.1e-27 125.9 101 57.4
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 3.5e-27 125.2 113 55.8
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 7.9e-27 124.0 93 62.4
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 2.3e-26 122.5 109 57.8
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 1.3e-24 116.7 88 63.6
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 6.9e-23 110.9 80 63.8
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 1.0e-21 107.1 110 46.4
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.2e-19 100.1 67 70.1
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 1.4e-18 96.7 93 50.5
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 3.9e-18 95.1 100 45.0
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 4.3e-17 91.7 67 58.2
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.2e-16 89.4 53 77.4
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 8.2e-16 87.4 69 65.2
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 1.1e-15 87.0 55 72.7
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 6.9e-15 84.3 90 46.7
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 2.7e-11 72.4 50 62.0
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.5e-09 66.6 42 69.0
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 5.7e-09 64.7 33 75.8
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 7.4e-09 64.3 104 37.5


User provided reference genes

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