Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.7e-126 456.1 237 100.0
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.7e-126 456.1 237 100.0
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 2.5e-109 399.1 241 87.1
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 5.5e-109 397.9 237 88.2
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 1.2e-84 317.0 233 75.5
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 1.4e-72 276.9 243 66.7
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 8.6e-54 214.5 252 50.4
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 1.6e-52 210.3 249 51.4
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.0e-51 207.6 245 51.4
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 1.5e-50 203.8 250 52.4
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.5e-50 203.8 246 52.8
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 6.3e-49 198.4 247 50.2
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 2.0e-47 193.4 245 50.6
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 2.7e-47 193.0 233 51.9
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 4.5e-47 192.2 263 49.0
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 5.9e-47 191.8 239 51.0
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.7e-46 190.3 267 46.8
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 2.3e-46 189.9 246 47.2
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 1.9e-45 186.8 244 49.2
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 1.9e-45 186.8 243 52.7
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 3.3e-45 186.0 234 50.9
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 7.3e-45 184.9 247 48.2
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 2.1e-44 183.3 276 45.7
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 3.6e-44 182.6 232 49.1
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 4.7e-44 182.2 238 50.4
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 6.1e-44 181.8 258 44.6
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 1.0e-43 181.0 243 51.9
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 1.4e-43 180.6 255 47.5
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 5.2e-43 178.7 240 50.4
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 1.5e-42 177.2 243 49.0
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 1.5e-42 177.2 257 46.3
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 7.5e-42 174.9 242 50.4
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 9.8e-42 174.5 233 48.5
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 1.3e-41 174.1 237 48.5
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.3e-41 174.1 239 46.0
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 6.4e-41 171.8 234 45.7
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 1.4e-40 170.6 224 49.1
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 1.4e-40 170.6 238 48.7
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.4e-40 170.6 237 48.1
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 2.4e-40 169.9 187 53.5
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 3.2e-40 169.5 233 51.1
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 4.1e-40 169.1 237 49.4
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.2e-39 167.5 261 46.7
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.6e-39 167.2 241 43.6
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 2.7e-39 166.4 225 47.6
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 3.5e-39 166.0 258 46.1
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 3.5e-39 166.0 234 45.7
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 4.6e-39 165.6 230 46.1
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 6.0e-39 165.2 227 46.3
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 7.8e-39 164.9 236 47.0
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 1.0e-38 164.5 228 48.7
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.0e-38 164.5 229 47.2
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.0e-38 164.5 233 47.2
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 2.3e-38 163.3 235 46.4
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 3.0e-38 162.9 251 46.2
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 3.9e-38 162.5 233 45.5
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 6.6e-38 161.8 261 44.1
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 1.1e-37 161.0 261 44.1
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.1e-37 161.0 239 45.6
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 1.1e-37 161.0 229 45.9
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.5e-37 160.6 224 47.3
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.5e-37 160.6 224 47.3
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.9e-37 160.2 242 43.4
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 4.3e-37 159.1 227 44.9
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 5.6e-37 158.7 227 47.6
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 7.3e-37 158.3 232 44.8
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 1.2e-36 157.5 231 42.0
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.1e-36 156.8 230 47.8
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 6.2e-36 155.2 227 44.9
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 6.2e-36 155.2 238 41.6
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 2.3e-35 153.3 248 46.4
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 6.8e-35 151.8 240 43.8
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 6.8e-35 151.8 190 50.0
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 8.9e-35 151.4 234 45.3
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 1.5e-34 150.6 270 42.2
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.0e-34 150.2 168 53.0
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 2.6e-34 149.8 236 43.6
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 3.4e-34 149.4 257 41.6
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 7.5e-34 148.3 234 44.4
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 7.5e-34 148.3 166 53.6
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 9.8e-34 147.9 239 42.7
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 1.7e-33 147.1 236 43.2
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 1.7e-33 147.1 268 42.2
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 2.2e-33 146.7 236 45.8
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 4.9e-33 145.6 169 52.1
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 6.4e-33 145.2 239 43.1
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 8.3e-33 144.8 255 43.1
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 8.3e-33 144.8 237 41.8
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.9e-32 143.7 202 45.5
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.4e-32 143.3 231 44.2
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 3.2e-32 142.9 232 43.1
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 4.1e-32 142.5 235 43.4
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 4.1e-32 142.5 167 50.3
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 7.1e-32 141.7 253 42.3
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 2.1e-31 140.2 181 43.6
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 2.1e-31 140.2 83 77.1
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.5e-31 139.4 238 41.6
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 4.6e-31 139.0 223 41.3
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 4.6e-31 139.0 223 41.3
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 6.0e-31 138.7 230 40.9
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 6.0e-31 138.7 229 43.7
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 6.0e-31 138.7 137 55.5
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 1.0e-30 137.9 230 40.9
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 1.3e-30 137.5 230 41.7
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.3e-30 137.5 249 40.2
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 1.3e-30 137.5 233 42.5
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 2.3e-30 136.7 262 42.0
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 3.0e-30 136.3 235 40.4
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 1.1e-29 134.4 230 42.6
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 1.5e-29 134.0 147 56.5
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.5e-29 134.0 168 47.6
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 3.3e-29 132.9 163 46.0
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 3.3e-29 132.9 163 46.0
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 4.3e-29 132.5 235 41.7
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 5.6e-29 132.1 173 49.1
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 7.3e-29 131.7 231 39.4
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 1.2e-28 131.0 242 40.9
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.2e-28 131.0 235 40.4
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 2.1e-28 130.2 205 44.9
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 3.6e-28 129.4 165 45.5
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 4.7e-28 129.0 227 41.4
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 6.2e-28 128.6 107 58.9
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.5e-26 124.0 235 40.9
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 3.4e-26 122.9 227 38.3
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 1.1e-24 117.9 219 39.3
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 2.4e-24 116.7 240 39.2
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 2.1e-23 113.6 109 58.7
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 4.6e-23 112.5 79 65.8
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 6.0e-23 112.1 67 79.1
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 6.0e-23 112.1 251 35.9
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 6.0e-23 112.1 88 62.5
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.3e-22 110.9 239 39.3
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 3.9e-22 109.4 74 67.6
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 2.5e-21 106.7 281 32.0
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 1.4e-19 100.9 125 46.4
Cpa.g.sc34.169 Carica papaya HOM05D004801 ORTHO05D005747 1.5e-18 97.4 163 42.3
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 7.6e-18 95.1 182 36.3
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 8.4e-17 91.7 196 37.2
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 1.1e-16 91.3 225 36.0
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 7.1e-16 88.6 117 42.7
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 4.3e-13 79.3 107 43.9
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 8.1e-12 75.1 164 32.9
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 9.0e-11 71.6 166 34.9
AT1G52270 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 2.0e-10 70.5 184 31.5
MSTRG.14327 Avicennia marina HOM05D004801 ORTHO05D005747 1.7e-06 57.4 126 38.1
BcaC08g44096 Brassica carinata HOM05D004801 ORTHO05D005747 1.7e-06 57.4 104 41.3
C03p65310 Brassica napus HOM05D004020 ORTHO05D004735 1.7e-06 57.4 121 38.8
BcaC01g02437 Brassica carinata HOM05D004020 ORTHO05D004735 6.6e-06 55.5 113 38.9


User provided reference genes

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