Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 0.0e+00 1400.2 698 100.0
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.8e-90 335.5 576 36.8
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.5e-85 318.9 387 42.1
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-81 308.5 385 41.0
MELO3C014073.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.0e-78 297.4 364 40.7
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 2.0e-74 284.6 476 37.6
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 2.6e-74 284.3 466 35.6
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 4.4e-74 283.5 445 38.0
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 3.0e-70 270.8 398 38.2
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 5.1e-70 270.0 453 36.2
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.3e-69 266.9 365 40.3
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-64 251.9 367 40.6
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-63 248.4 262 49.2
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.5e-63 247.3 290 46.9
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.0e-59 233.8 367 37.3
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.2e-59 233.4 416 35.3
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 5.2e-59 233.4 388 36.6
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.4e-58 230.3 416 34.9
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 4.9e-57 226.9 317 40.1
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.4e-56 225.3 454 35.5
CsaV3_5G024960 Cucumis sativus L. HOM05D007588 ORTHO05D001339 7.8e-55 219.5 273 38.1
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-54 218.8 375 33.3
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 1.9e-53 214.9 189 50.8
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 1.8e-51 208.4 316 36.7
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.1e-51 207.6 203 48.3
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.0e-51 206.1 400 36.0
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.0e-51 206.1 439 33.9
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.2e-48 197.2 244 41.8
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.0e-46 192.6 240 42.5
Sed0016803 Sechium edule HOM05D007588 ORTHO05D001339 1.1e-45 189.1 446 32.7
Sed0000206 Sechium edule HOM05D007588 ORTHO05D001339 3.3e-45 187.6 365 33.7
Sed0007767 Sechium edule HOM05D007588 ORTHO05D001339 5.3e-43 180.3 465 30.8
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.6e-42 176.4 144 52.1
MELO3C004802.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-41 175.3 141 53.9
Sed0000745 Sechium edule HOM05D007588 ORTHO05D001339 1.7e-41 175.3 238 41.6
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.4e-41 173.3 205 41.0
ClCG08G006820 Citrullus lanatus HOM05D007588 ORTHO05D001339 7.1e-40 169.9 162 51.9
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.1e-40 169.9 163 48.5
MELO3C032919.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-39 168.3 141 53.9
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.8e-36 157.9 148 51.4
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-35 155.6 148 50.0
MELO3C024617.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.1e-35 154.5 230 37.8
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 5.3e-35 153.7 149 40.9
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 1.5e-34 152.1 290 32.1
Sed0008385 Sechium edule HOM05D007588 ORTHO05D001339 2.0e-34 151.8 216 37.5
MELO3C027442.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.4e-34 151.0 267 32.6
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 1.0e-33 149.4 157 43.9
Sed0017408 Sechium edule HOM05D007588 ORTHO05D001339 3.2e-32 144.4 206 40.8
Sed0015279 Sechium edule HOM05D007588 ORTHO05D001339 7.9e-31 139.8 392 28.6
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-26 125.6 343 23.9
ClCG07G010540 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.6e-26 124.8 86 59.3
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.0e-25 120.6 142 38.7
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.1e-24 119.4 312 27.6
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.9e-24 118.6 216 31.5
ClCG10G006620 Citrullus lanatus HOM05D007588 ORTHO05D001339 7.2e-24 116.7 241 28.2
ClCG05G011080 Citrullus lanatus HOM05D007588 ORTHO05D001339 9.3e-24 116.3 200 33.5
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-22 112.8 301 25.6
ClCG08G006830 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.3e-22 112.5 70 62.9
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.8e-22 112.1 272 30.1
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.8e-22 112.1 338 29.0
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-22 112.1 309 27.5
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 2.3e-22 111.7 155 34.8
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-22 110.5 375 22.9
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-21 109.0 346 23.4
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-21 109.0 337 24.0
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 1.5e-21 109.0 301 26.9
Lj1A438T30 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-21 108.6 298 22.8
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-21 107.8 296 25.3
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-21 107.5 315 24.8
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 7.4e-21 106.7 291 26.5
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-21 106.3 167 31.1
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 1.3e-20 105.9 234 26.1
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-20 105.9 314 25.5
ClCG06G009830 Citrullus lanatus HOM05D009184 ORTHO05D015610 2.2e-20 105.1 140 36.4
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 8.2e-20 103.2 261 28.7
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-19 100.9 285 26.0
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-19 100.9 234 25.6
ClCG04G001010 Citrullus lanatus HOM05D009184 ORTHO05D015610 5.3e-19 100.5 101 42.6
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-18 99.4 293 23.5
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-18 97.8 159 29.6
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-18 97.1 193 29.0
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-18 97.1 228 26.3
ClCG01G016460 Citrullus lanatus HOM05D009184 ORTHO05D001339 7.7e-18 96.7 303 24.8
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-18 96.7 303 25.1
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 7.7e-18 96.7 260 27.7
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-18 96.7 310 24.5
Sed0000711 Sechium edule HOM05D048706 ORTHO05D001339 7.7e-18 96.7 174 33.9
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-17 96.3 598 21.9
ClCG05G012190 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.2e-17 95.1 93 39.8
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 8.5e-17 93.2 197 28.4
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 1.1e-16 92.8 219 28.3
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.9e-16 92.0 177 26.6
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.5e-16 91.7 159 28.9
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 3.2e-16 91.3 154 29.9
MELO3C029351.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.2e-16 90.1 108 42.6
ClCG03G017440 Citrullus lanatus HOM05D007588 ORTHO05D001339 9.4e-16 89.7 75 49.3
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 9.4e-16 89.7 256 25.0
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 9.4e-16 89.7 313 22.7
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-15 89.0 583 21.3
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 2.7e-15 88.2 238 26.5
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-15 88.2 425 22.4
ClCG07G006500 Citrullus lanatus HOM05D005236 ORTHO05D006557 3.6e-15 87.8 103 37.9
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-15 87.8 374 23.3
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 3.6e-15 87.8 402 23.6
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-15 87.4 324 21.0
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-14 86.3 219 26.0
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.4e-14 85.9 351 25.4
Lju583C3G3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-14 85.9 194 23.2
Sed0013444 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-14 85.9 295 28.1
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.8e-14 85.5 226 24.3
MELO3C032938.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.9e-14 84.3 116 38.8
Lj1C860G2 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-14 84.0 271 22.9
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-14 84.0 149 28.9
Sed0021777 Sechium edule HOM05D007588 ORTHO05D001339 6.7e-14 83.6 105 40.0
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.8e-14 83.2 163 31.9
MELO3C033167.2 Cucumis melo HOM05D000877 ORTHO05D001339 8.8e-14 83.2 84 41.7
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-13 82.8 298 22.1
Lj3C921G6 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-13 80.9 343 21.6
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 9.7e-13 79.7 296 22.0
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-13 79.7 151 25.8
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-12 79.3 327 22.3
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.2e-12 78.6 59 54.2
Lj1P804T34 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-12 78.6 114 29.8
Lj4P818T19 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-12 78.6 243 23.9
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-12 77.4 448 23.2
Sed0014331 Sechium edule HOM05D007588 ORTHO05D001339 4.8e-12 77.4 118 37.3
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-12 77.0 252 21.8
Lj6C285T4 Lonicera japonica HOM05D002180 ORTHO05D001339 8.2e-12 76.6 307 21.8
CsaV3_1G009110 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.1e-11 76.3 78 51.3
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 1.4e-11 75.9 158 27.2
Lj2P420T16 Lonicera japonica HOM05D009066 ORTHO05D001339 1.4e-11 75.9 126 27.8
ClCG08G006760 Citrullus lanatus HOM05D066730 ORTHO05D044596 2.4e-11 75.1 60 61.7
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-11 75.1 116 33.6
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-11 74.7 166 23.5
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 5.3e-11 73.9 86 34.9
Sed0000388 Sechium edule HOM05D007588 ORTHO05D001339 6.9e-11 73.6 231 27.3
ClCG04G003160 Citrullus lanatus HOM05D002427 ORTHO05D002818 9.1e-11 73.2 100 30.0
MELO3C028681.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.1e-11 73.2 132 30.3
Sed0010098 Sechium edule HOM05D007588 ORTHO05D001339 1.5e-10 72.4 58 51.7
ClCG06G010890 Citrullus lanatus HOM05D014232 ORTHO05D001339 2.6e-10 71.6 263 28.1
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-10 71.6 87 35.6
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-10 70.9 98 29.6
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 4.5e-10 70.9 150 30.7
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-10 70.1 117 29.1
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 1.0e-09 69.7 68 39.7
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-09 69.7 105 30.5
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-09 68.9 371 21.0
ClCG08G003110 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.2e-09 68.6 67 37.3
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-09 68.6 113 31.0
Sed0010813 Sechium edule HOM05D007588 ORTHO05D001339 2.2e-09 68.6 66 45.5
Lj2C1216G5 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-09 67.4 263 21.7
Lj8A191T27 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-09 67.4 318 23.3
Lj8P504T20 Lonicera japonica HOM05D009066 ORTHO05D001339 8.5e-09 66.6 154 26.6
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-08 65.9 105 30.5
Lj2C42T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-08 65.5 89 34.8
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 3.2e-08 64.7 65 41.5
Lj2P897T21 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-08 64.7 100 30.0
MELO3C004097.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-07 62.8 302 24.5
Lj7P489T18 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-07 62.4 140 24.3
MELO3C020247.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-07 62.0 201 29.4
Lj3A585T50 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-07 62.0 71 36.6
MELO3C004723.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.7e-07 61.6 85 40.0
CsaV3_2G008840 Cucumis sativus L. HOM05D007588 ORTHO05D001339 2.7e-07 61.6 55 43.6
Sed0000544 Sechium edule HOM05D007588 ORTHO05D001339 3.6e-07 61.2 66 37.9
PSO210G7745 Papaver somniferum HOM05D002180 ORTHO05D001339 4.7e-07 60.8 147 27.9
ClCG08G003120 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.1e-07 60.5 59 42.4
PSO017G7198 Papaver somniferum HOM05D002180 ORTHO05D001339 6.1e-07 60.5 165 29.1
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 6.1e-07 60.5 99 34.3
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 7.9e-07 60.1 99 34.3
CSS0039691 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.0e-06 59.7 81 34.6
MELO3C012892.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-06 59.3 60 43.3
ClCG00G005620 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.8e-06 58.9 143 30.1
ClCG06G011820 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.8e-06 58.9 143 30.1
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 1.8e-06 58.9 63 39.7
ClCG04G012800 Citrullus lanatus HOM05D009184 ORTHO05D015610 3.0e-06 58.2 60 41.7
Sed0026738 Sechium edule HOM05D007588 ORTHO05D001339 3.0e-06 58.2 58 39.7
Gohir.A06G194460 Gossypium hirsutum HOM05D000003 ORTHO05D015081 5.2e-06 57.4 77 29.9
Lj3P194T52 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-06 57.4 99 30.3
Sed0014201 Sechium edule HOM05D007588 ORTHO05D001339 5.2e-06 57.4 47 53.2
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 6.7e-06 57.0 83 32.5
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.7e-06 57.0 83 32.5
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.7e-06 57.0 83 32.5
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.7e-06 57.0 83 32.5
CsaV3_6G041450 Cucumis sativus L. HOM05D007588 ORTHO05D001339 8.8e-06 56.6 141 26.2


User provided reference genes

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