Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 3.9e-183 644.8 358 100.0
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 6.9e-156 554.3 349 90.0
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 5.5e-153 544.7 349 88.3
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 1.0e-127 460.7 351 75.8
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 2.3e-127 459.5 350 76.0
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 2.4e-124 449.5 348 74.4
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 4.5e-123 445.3 352 75.0
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 2.9e-114 416.0 350 69.1
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 9.4e-113 411.0 351 67.8
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 2.7e-112 409.5 350 67.7
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 1.4e-108 397.1 352 65.9
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 3.8e-106 389.0 350 67.1
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 3.8e-106 389.0 350 64.0
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 1.9e-105 386.7 350 64.9
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 3.2e-105 386.0 350 65.4
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 3.2e-105 386.0 350 65.4
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 1.2e-104 384.0 346 65.0
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 3.0e-103 379.4 350 65.1
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 4.1e-100 369.0 352 61.1
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 5.4e-100 368.6 355 63.7
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 9.1e-100 367.9 346 60.7
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 5.9e-99 365.2 353 63.5
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 1.0e-98 364.4 353 63.7
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 1.9e-97 360.1 359 62.4
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 3.6e-96 355.9 351 59.5
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 6.8e-95 351.7 352 63.6
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 4.4e-94 349.0 348 60.1
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 4.4e-94 349.0 353 60.6
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 9.8e-94 347.8 353 60.9
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 9.8e-94 347.8 353 60.9
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 2.2e-93 346.7 357 61.1
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 1.8e-92 343.6 349 60.5
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 2.4e-92 343.2 343 63.0
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 7.0e-92 341.7 334 63.2
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 2.7e-91 339.7 352 60.2
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 1.3e-90 337.4 353 59.5
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.3e-90 337.4 353 59.5
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 6.6e-90 335.1 342 59.9
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 6.6e-90 335.1 360 58.1
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 1.9e-89 333.6 355 59.7
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 7.3e-89 331.6 349 60.2
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 4.7e-88 328.9 351 58.7
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 1.0e-87 327.8 347 60.5
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 2.3e-87 326.6 348 58.3
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 5.2e-87 325.5 349 59.0
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 5.2e-87 325.5 349 59.0
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 2.2e-85 320.1 352 57.1
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 2.9e-85 319.7 359 58.5
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 1.1e-84 317.8 356 58.4
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 7.0e-84 315.1 353 57.5
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 5.0e-82 308.9 354 58.2
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 5.0e-82 308.9 351 55.6
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 1.9e-81 307.0 348 54.9
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 3.3e-81 306.2 350 56.3
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 9.5e-81 304.7 362 56.1
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 1.2e-80 304.3 356 56.7
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 4.7e-80 302.4 351 55.8
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 4.7e-80 302.4 344 54.4
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 6.2e-80 302.0 353 56.9
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 3.1e-79 299.7 360 55.0
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 5.2e-79 298.9 357 53.8
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 2.6e-78 296.6 352 55.4
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 2.6e-78 296.6 351 56.1
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 5.8e-78 295.4 352 55.7
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 7.5e-78 295.0 371 54.4
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 7.5e-78 295.0 349 54.4
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 1.7e-77 293.9 354 55.1
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 4.9e-77 292.4 354 55.9
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 4.9e-77 292.4 354 55.9
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 6.4e-77 292.0 356 55.1
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 6.4e-77 292.0 356 55.1
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 2.7e-75 286.6 355 55.8
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 6.0e-75 285.4 351 54.4
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 1.0e-74 284.6 346 53.2
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.9e-73 280.4 390 50.8
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 3.3e-73 279.6 341 54.8
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 3.6e-72 276.2 346 54.9
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 3.6e-72 276.2 352 51.7
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 4.7e-72 275.8 345 54.2
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 6.2e-72 275.4 356 52.2
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 6.8e-71 271.9 350 50.0
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 3.7e-69 266.2 357 50.4
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 8.3e-69 265.0 369 49.3
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 1.6e-67 260.8 338 50.9
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 3.5e-67 259.6 353 50.7
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 3.5e-67 259.6 386 45.6
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 1.3e-66 257.7 355 49.9
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 3.9e-66 256.1 320 50.3
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 1.5e-65 254.2 372 49.2
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 3.6e-64 249.6 373 47.7
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 4.7e-64 249.2 277 58.1
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 4.0e-63 246.1 350 50.3
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 2.6e-62 243.4 341 51.0
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 7.6e-62 241.9 348 50.0
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 2.2e-61 240.4 348 48.0
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 2.7e-59 233.4 339 48.1
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 5.1e-58 229.2 371 44.2
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 5.1e-58 229.2 342 46.5
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 1.5e-57 227.6 370 46.2
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 1.5e-57 227.6 348 47.1
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 4.3e-57 226.1 349 47.0
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 5.6e-57 225.7 305 45.9
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 2.8e-56 223.4 343 46.6
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 4.7e-56 222.6 371 43.4
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.4e-55 221.1 342 46.2
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 1.8e-55 220.7 361 44.9
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 1.2e-54 218.0 337 46.9
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 4.4e-54 216.1 364 44.2
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 1.6e-51 207.6 331 46.8
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 3.0e-50 203.4 342 44.7
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 3.0e-50 203.4 342 44.7
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 8.7e-50 201.8 349 44.1
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 1.9e-49 200.7 320 44.7
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 9.6e-49 198.4 317 45.7
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 2.1e-48 197.2 351 41.3
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 1.5e-46 191.0 294 48.6
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 2.6e-46 190.3 358 39.9
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 2.4e-44 183.7 357 42.6
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 2.8e-40 170.2 321 38.3
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 2.8e-40 170.2 314 42.0
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 9.0e-39 165.2 342 38.0
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 2.0e-38 164.1 211 54.0
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 5.5e-36 156.0 313 37.7
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 7.1e-36 155.6 366 38.5
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 2.1e-35 154.1 131 67.9
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 1.0e-34 151.8 277 46.2
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.3e-34 151.4 338 36.7
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 7.4e-33 145.6 321 40.5
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 1.3e-32 144.8 355 35.8
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 1.5e-30 137.9 321 35.2
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 2.6e-30 137.1 347 36.0
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.3e-29 134.8 190 48.9
HanXRQChr11g0320651 Helianthus annuus HOM05D004638 ORTHO05D005443 1.9e-25 120.9 196 41.3
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 2.2e-24 117.5 106 60.4
Manes.12G121700 Manihot esculenta HOM05D004638 ORTHO05D005443 3.8e-21 106.7 197 46.7
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 2.5e-20 104.0 268 38.4
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 4.2e-20 103.2 170 42.9
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 2.1e-19 100.9 102 53.9
CBR_g30748 Chara braunii HOM05D003542 ORTHO05D004799 2.7e-19 100.5 428 29.4
Lj3g0021975 Lotus japonicus HOM05D004638 ORTHO05D005443 1.4e-15 88.2 155 45.8
unitig_22.g5966 Utricularia gibba HOM05D004638 ORTHO05D005443 8.5e-13 79.0 173 38.7
MCO04G484 Micromonas commoda HOM05D004638 ORTHO05D005443 2.5e-12 77.4 356 31.7
AUR62039395 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.0e-10 72.0 102 46.1
Actinidia16422 Actinidia chinensis HOM05D004638 ORTHO05D005443 1.4e-10 71.6 140 50.0
Nitab4.5_0000047g0220 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.6e-09 67.4 90 43.3
RcHm_v2.0_Chr3g0493171 Rosa chinensis HOM05D004638 ORTHO05D005443 9.7e-09 65.5 63 54.0
RcHm_v2.0_Chr5g0061161 Rosa chinensis HOM05D004638 ORTHO05D005443 1.4e-07 61.6 61 55.7
Sabra08G0132300 Salix brachista HOM05D004638 ORTHO05D005443 9.1e-07 58.9 174 34.5
Medtr2g079040 Medicago truncatula HOM05D004638 ORTHO05D005443 3.5e-06 57.0 50 52.0


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