Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 0.0e+00 2253.8 1128 100.0
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 0.0e+00 1922.5 1144 86.0
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 0.0e+00 1686.4 1130 77.7
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 0.0e+00 1535.0 901 85.3
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.0e-278 963.0 1175 50.2
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 7.7e-278 961.1 1183 49.4
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.6e-267 926.8 1162 48.5
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.0e-266 924.1 1165 48.1
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 2.6e-265 919.5 1173 48.9
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.8e-264 916.0 1194 47.8
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.8e-264 916.0 1223 47.1
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.8e-261 905.6 1163 47.6
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.6e-259 899.0 1172 46.8
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.5e-257 893.6 1239 45.6
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 8.3e-256 887.9 1189 45.8
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.8e-255 886.7 1170 47.4
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.6e-254 883.6 1159 48.5
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 7.7e-254 881.3 1150 47.7
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.2e-249 867.5 1146 46.8
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.9e-248 862.1 1208 44.6
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 7.0e-247 858.2 1187 45.1
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 1.0e-245 854.4 1205 45.0
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 2.3e-245 853.2 1163 46.7
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 8.9e-242 841.3 1184 45.7
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 7.5e-241 838.2 1189 44.7
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 4.3e-236 822.4 1149 44.6
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.8e-235 819.7 1124 46.1
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 7.5e-233 811.6 1203 43.6
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 7.5e-233 811.6 1162 45.5
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 7.5e-233 811.6 1188 45.0
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 6.4e-232 808.5 1161 45.2
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.9e-231 807.0 1188 45.3
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.4e-231 806.6 1000 47.5
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.7e-229 800.4 1173 44.6
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 3.9e-229 799.3 1170 45.1
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 6.6e-229 798.5 1183 44.0
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 4.7e-227 792.3 1218 43.1
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.4e-223 778.9 1186 42.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.7e-222 776.5 1199 43.6
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.3e-221 774.2 1190 43.4
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 5.1e-221 772.3 1136 43.8
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 3.3e-220 769.6 1159 43.6
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 3.6e-219 766.1 1164 42.7
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 8.1e-219 765.0 1157 43.6
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.4e-215 754.2 1137 43.7
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 4.2e-215 752.7 1174 43.2
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.3e-213 747.7 913 48.8
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 4.8e-211 739.2 1172 41.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 6.2e-211 738.8 1142 43.0
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.1e-210 738.0 1166 41.8
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.1e-207 728.0 1154 44.0
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.4e-207 727.6 1143 42.1
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.9e-207 727.2 1157 42.3
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.9e-207 727.2 1113 41.9
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 3.2e-207 726.5 1155 42.8
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 3.5e-206 723.0 1126 43.0
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 6.0e-206 722.2 1106 42.6
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 6.0e-206 722.2 1159 41.1
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 5.1e-205 719.2 1150 42.2
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 5.1e-205 719.2 1150 41.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 8.7e-205 718.4 1158 41.9
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.5e-204 717.6 1110 42.5
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 4.3e-204 716.1 1145 40.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 5.3e-202 709.1 1145 40.9
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 2.6e-201 706.8 1157 42.0
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 9.9e-201 704.9 1131 41.4
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.2e-200 703.7 1122 41.2
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 3.8e-200 703.0 1140 43.1
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 8.4e-200 701.8 1156 41.0
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.2e-198 698.0 556 63.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 4.6e-198 696.0 1133 40.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 6.0e-198 695.7 1202 39.1
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.3e-197 694.5 1138 40.4
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.3e-197 693.7 1118 41.1
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.3e-197 693.7 908 47.2
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.5e-196 690.3 1175 40.6
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.5e-196 690.3 1217 39.3
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 5.6e-196 689.1 1121 41.0
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.6e-195 687.6 1109 41.4
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 2.1e-195 687.2 1172 40.0
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 2.4e-194 683.7 554 63.2
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 4.5e-193 679.5 1103 41.0
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 7.9e-190 668.7 1179 39.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 2.3e-189 667.2 1042 40.7
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 6.7e-189 665.6 898 43.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.9e-188 664.1 1055 41.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 3.3e-188 663.3 834 47.4
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.4e-186 657.1 1112 39.0
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.9e-184 650.2 1068 40.7
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.9e-183 647.5 914 43.3
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 4.2e-183 646.4 1071 42.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 4.6e-182 642.9 1059 40.5
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.5e-180 637.9 994 44.2
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.5e-177 627.9 1182 38.4
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 5.0e-168 596.3 1044 37.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.7e-163 580.1 1060 37.6
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.8e-163 579.7 1194 37.9
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.0e-160 572.0 838 43.1
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 5.0e-160 569.7 1086 36.3
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.1e-158 564.3 576 51.4
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 5.2e-157 559.7 1088 37.1
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 7.5e-132 476.1 1188 33.3
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 6.4e-123 446.4 421 55.1
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.3e-123 446.0 361 63.2
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 4.6e-121 440.3 914 36.5
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 1.2e-118 432.2 316 66.8
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.7e-115 421.8 744 36.2
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 8.3e-115 419.5 560 42.7
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.2e-113 415.6 434 50.0
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 3.5e-113 414.1 520 44.6
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.6e-112 409.5 944 35.7
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.1e-111 409.1 499 43.3
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.4e-106 392.1 517 43.9
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.3e-96 359.0 798 36.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 7.1e-74 283.5 710 33.0
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 2.5e-71 275.0 229 64.2
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 5.3e-69 267.3 750 32.0
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.4e-61 242.7 227 54.2
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 7.5e-31 140.6 362 34.5
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.1e-29 135.2 317 32.8
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 8.3e-22 110.5 613 26.6
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 9.2e-21 107.1 103 57.3
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.8e-20 104.0 137 49.6
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 3.3e-18 98.6 80 62.5
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.2e-15 90.1 202 29.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.6e-12 78.2 176 36.4
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.0e-11 77.0 57 57.9
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 2.3e-11 75.9 82 51.2
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 3.0e-11 75.5 51 64.7
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 5.0e-11 74.7 71 49.3
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.5e-10 73.2 55 58.2
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.5e-10 72.4 66 51.5
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 5.6e-10 71.2 153 32.7


User provided reference genes

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