Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 9.9e-83 310.1 156 100.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 4.2e-49 198.4 102 97.1
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 3.5e-48 195.3 102 96.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 7.4e-46 187.6 101 94.1
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 2.8e-45 185.7 101 93.1
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 4.8e-45 184.9 106 86.8
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 8.2e-45 184.1 106 87.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.4e-44 183.3 101 90.1
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.4e-44 182.6 101 90.1
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.4e-44 182.6 101 90.1
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.4e-44 182.6 101 90.1
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 2.4e-44 182.6 102 90.2
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 6.9e-44 181.0 106 84.0
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 4.5e-43 178.3 104 84.6
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 5.8e-43 177.9 101 86.1
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 7.6e-43 177.6 101 85.1
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.7e-42 176.4 106 84.9
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.2e-42 176.0 101 85.1
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 4.9e-42 174.9 101 84.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 6.5e-42 174.5 100 80.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 8.4e-42 174.1 101 85.1
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.1e-41 173.7 100 79.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.4e-41 173.3 98 86.7
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.4e-41 173.3 102 77.5
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.2e-41 171.8 100 84.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 4.2e-41 171.8 106 77.4
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 5.5e-41 171.4 102 76.5
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 5.5e-41 171.4 100 78.0
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.2e-40 170.2 102 77.5
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.2e-40 170.2 101 82.2
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.7e-40 169.1 100 83.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 3.5e-40 168.7 97 86.6
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 4.6e-40 168.3 102 76.5
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 6.0e-40 167.9 97 85.6
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 6.0e-40 167.9 98 81.6
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 6.0e-40 167.9 97 84.5
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.0e-39 167.2 98 82.7
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.0e-39 167.2 97 85.6
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.0e-39 167.2 106 74.5
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.0e-39 167.2 100 81.0
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.3e-39 166.8 106 77.4
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.3e-39 166.8 101 81.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.3e-39 166.8 102 76.5
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.8e-39 166.4 100 82.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.3e-39 166.0 101 79.2
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 5.1e-39 164.9 102 73.5
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 5.1e-39 164.9 102 73.5
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 5.1e-39 164.9 98 82.7
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 6.7e-39 164.5 95 84.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.7e-39 164.5 106 75.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 8.7e-39 164.1 101 79.2
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 8.7e-39 164.1 101 79.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.1e-38 163.7 101 79.2
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.9e-38 162.9 101 78.2
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.9e-38 162.9 101 78.2
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.5e-38 162.5 96 81.2
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 4.3e-38 161.8 101 77.2
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 5.7e-38 161.4 100 78.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 7.4e-38 161.0 95 80.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.3e-37 160.2 136 64.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.6e-37 159.8 100 77.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.6e-37 159.8 103 77.7
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 6.3e-37 157.9 96 78.1
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 6.3e-37 157.9 96 78.1
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 6.3e-37 157.9 96 78.1
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 6.3e-37 157.9 95 78.9
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.1e-36 157.1 100 77.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.1e-36 157.1 99 71.7
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.4e-36 156.8 93 82.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.4e-36 156.0 101 76.2
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 4.1e-36 155.2 95 73.7
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 9.0e-36 154.1 94 73.4
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-35 153.7 102 70.6
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 2.0e-35 152.9 92 79.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.6e-35 152.5 145 58.6
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 3.4e-35 152.1 94 79.8
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.0e-34 150.6 103 75.7
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.0e-34 150.6 103 75.7
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.3e-34 150.2 103 71.8
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.2e-34 149.4 93 78.5
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.2e-34 149.4 100 74.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.2e-34 149.4 100 74.0
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.8e-34 148.7 93 78.5
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.0e-34 148.3 95 72.6
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 8.5e-34 147.5 90 80.0
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.1e-33 147.1 95 76.8
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.4e-33 146.7 97 70.1
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.5e-33 146.0 102 65.7
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.6e-32 143.3 103 68.9
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.9e-31 138.7 81 79.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.5e-30 136.7 93 72.0
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.0e-30 136.3 80 82.5
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 3.3e-30 135.6 77 84.4
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.3e-30 135.6 80 80.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 7.4e-30 134.4 80 77.5
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 7.4e-30 134.4 78 85.9
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 8.2e-29 131.0 89 67.4
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 9.1e-28 127.5 91 64.8
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 5.9e-27 124.8 82 72.0
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.9e-26 122.5 94 61.7
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 3.8e-26 122.1 91 63.7
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.7e-24 115.2 82 72.0
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 7.9e-24 114.4 97 56.7
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 1.0e-23 114.0 86 68.6
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.9e-23 112.1 77 75.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.0e-22 109.8 74 70.3
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 2.0e-22 109.8 56 96.4
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.8e-21 105.9 92 55.4
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 4.8e-21 105.1 58 86.2
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-19 100.5 71 64.8
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 3.5e-19 99.0 55 85.5
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 3.8e-18 95.5 96 54.2
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 3.0e-15 85.9 58 72.4
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 8.2e-13 77.8 46 80.4
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 2.7e-08 62.8 88 33.0
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 3.6e-08 62.4 53 58.5
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.0e-07 59.3 45 53.3


User provided reference genes

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