Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G013820 Citrullus lanatus HOM05D003453 ORTHO05D004154 9.2e-75 283.5 146 100.0
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.3e-17 92.8 174 40.8
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.7e-15 85.5 174 39.7
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 1.2e-13 80.5 94 53.2
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 7.7e-13 77.8 81 58.0
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 8.5e-12 74.3 80 57.5
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 1.1e-11 73.9 77 58.4
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 1.5e-11 73.6 187 35.8
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.5e-11 73.6 166 38.0
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.9e-11 73.2 94 47.9
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 7.2e-11 71.2 79 54.4
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 7.2e-11 71.2 162 38.3
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 9.4e-11 70.9 156 39.1
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 1.2e-10 70.5 172 35.5
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.6e-10 70.1 89 48.3
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 2.1e-10 69.7 182 36.8
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 2.1e-10 69.7 75 54.7
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 4.7e-10 68.6 70 57.1
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 1.0e-09 67.4 75 54.7
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 1.0e-09 67.4 75 54.7
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 1.0e-09 67.4 79 50.6
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.8e-09 66.6 161 34.2
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.8e-09 66.6 161 34.2
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 2.3e-09 66.2 169 35.5
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 2.3e-09 66.2 83 50.6
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 2.3e-09 66.2 70 52.9
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 4.0e-09 65.5 81 48.1
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 5.2e-09 65.1 94 47.9
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 6.7e-09 64.7 159 37.1
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 8.8e-09 64.3 85 49.4
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.2e-08 63.9 145 37.2
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.5e-08 63.5 130 36.9
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.5e-08 63.5 174 34.5
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 3.3e-08 62.4 70 52.9
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 3.3e-08 62.4 174 33.9
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.3e-08 62.4 174 33.9
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 7.5e-08 61.2 138 39.1
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 9.7e-08 60.8 127 40.2
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.3e-07 60.5 71 50.7
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 2.2e-07 59.7 65 56.9
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 2.8e-07 59.3 70 51.4
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 2.8e-07 59.3 140 37.9
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 3.7e-07 58.9 128 36.7
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 3.7e-07 58.9 174 33.3
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 4.8e-07 58.5 170 31.8
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 4.8e-07 58.5 165 33.3
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 6.3e-07 58.2 183 31.1
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 1.4e-06 57.0 157 34.4
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 1.4e-06 57.0 128 37.5
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 3.1e-06 55.8 168 30.4
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 4.1e-06 55.5 128 35.2
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 5.3e-06 55.1 43 62.8
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 7.0e-06 54.7 114 36.8
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 9.1e-06 54.3 65 52.3


User provided reference genes

Program Settings